Zygosaccharomyces rouxii: ZYRO0D16302g
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Entry
ZYRO0D16302g CDS
T01118
Name
(RefSeq) CCR4-NOT core subunit NOT3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ZYRO0D16302g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zro03019
]
ZYRO0D16302g
Messenger RNA biogenesis [BR:
zro03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
ZYRO0D16302g
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
ZYRO0D16302g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
8204407
NCBI-ProteinID:
XP_002497139
UniProt:
C5DWN7
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Position
D:1357223..1359712
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AA seq
829 aa
AA seq
DB search
MAHRKLQQEIDRVFKKINEGLEIFDTYYERHENCTNNPSQKDKLESDLKREVKKLQRLRE
QIKSWQSSPDIKDKDSLLDYRRSVEIAMEKYKAVEKASKEKAYSNISLKKSDMLDPKERE
RRDVSEFLSNDIEELERQYDSLQVEVDKLILLNKKKKTASSSNDDKKDKLKTLQSRYRWH
QQQMELALRLLANEELDPEDVREIQDDISYFVDSNQEPDFVEDETIYDQLNLQSNEAIAH
EVAQYFASQQAEEAEDDDASTVTTTKDGTKLSKKEQRKLEREAKKAAKSASRLPDADVSP
SNGPSSPILSTTSTATVTTEIAEPPSSKQSKSPSPALDVVESSHSVMTTAPSTAKSPNGY
NSSAPSTAPTEVEEHQVVHTHIHQSQNGITTTSTLKPATVPARPAGDLKWAVAASQGVEK
DKKNNSHGGSNTTTGTSTPSAAATATAAHAAATGSTTASSNVSSRINSAANTPRLGTPSL
ATPTLAQHLEKSALTNSNANSAATAAAVLAAGAAAVNTNNKAIYKNGHSSMPTTATSALA
HGNETHAEGEKNFNEKSTDIPPVVVDDYQSDVTDDELEQEPQPEPLSQDELRRREETREK
LRKDFVQDFDLLVLPSGIQEFIMGAELFDNKIEAPDGKMGGYRRSRDECRIPRFDDVPLG
VNPPAPLDAFRSTEQWDILRCSLRPIIQNSELNDQEKYEAILENFRSLEMFTLFYNYYFA
VTPLEQEIASIILSERDWKVSKNCAMWFLRQSETKFANELCEVADYKIFKLDDWTVIDRL
NFKLDYAALKNPSLVADSQLPKAQETDVLSHGQQLLQQLKQGGKSSILA
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcccatcgtaagcttcaacaggagatcgatagggtctttaagaaaattaacgaaggg
ctggaaatttttgacacttattatgaaaggcatgaaaattgtaccaataacccatctcaa
aaggataagttagaatctgatcttaagagagaggtgaagaagctgcaaaggcttcgggaa
cagattaagtcatggcagagttcaccagatattaaggataaggattcgctattggattac
aggcggtctgtagaaatagcaatggaaaagtataaagctgtggagaaggcttctaaggag
aaagcttattctaatataagtttgaaaaaatcagatatgttggatccaaaggaaagggag
aggagagatgtttcggagtttctgtcgaatgatattgaggaattggagagacagtacgat
tctttacaagtagaagtggacaagctgatattgttgaataagaaaaagaaaacagcatca
tcttccaatgatgacaaaaaggataaacttaaaactttacaatctaggtacagatggcat
caacagcagatggaattggcacttagacttttggcaaatgaagaattggatccagaagat
gtaagggaaattcaagatgatatcagttattttgttgactcaaatcaggaacctgatttt
gtagaagatgaaacgatttacgatcaactgaatttacaatctaatgaagcaattgctcat
gaagtggctcagtatttcgcctctcaacaagcagaagaggcagaagatgatgatgcttct
acagtgaccactacaaaggatggtacaaaattatctaaaaaggaacagaggaaactcgaa
agagaggcgaaaaaagccgctaaaagtgcgtcaagattaccagacgcagatgttagtcct
tctaatggtccaagttctccaattttgtctactaccagtactgctaccgttaccacggaa
attgcagaaccaccttcctccaaacagagtaaatcaccatcgccggcgctggacgtggtg
gaatcatctcatagtgtaatgaccactgcaccaagtactgcaaaaagcccgaatggctat
aacagttcagctccatcaacggcacctacagaagtagaagaacaccaagtggtacatacg
catatccatcaaagccaaaatggtattacgacgacgagtaccttgaaacctgctacggtg
ccggcaagacctgctggtgatttaaaatgggcagtagcagcctcgcaaggtgtagaaaag
gataaaaagaataactctcacggtggatccaatacaacgacaggtacctcaacaccttct
gctgctgcaacagccactgctgcacatgcagctgccactggtagtacgaccgcttcttca
aacgttagcagtagaattaatagtgccgctaatacacctcgtttgggtactccatctttg
gctacaccaactttagcacaacacttggaaaaatccgcattgaccaattcgaatgcgaat
tcagccgctactgctgctgccgtattagcagctggtgctgctgccgtgaataccaataat
aaagctatttataagaatggtcattcatctatgccgacgacagcaacttctgctcttgcg
catggtaatgaaactcatgcagagggggaaaagaattttaatgaaaagagtacagatatt
ccacccgtggtggttgacgattatcaatcggatgtaacagatgatgaactagagcaagaa
ccacaaccagaacctctttcacaggatgaattgcgcaggagggaagagactcgagaaaaa
cttaggaaagatttcgttcaagatttcgacctattggtactgccaagtggtattcaagag
tttatcatgggtgctgaattgtttgacaataaaattgaagcaccagatggtaaaatgggt
ggctacagaagatcaagagatgaatgccgaattccacgttttgatgatgttcctttgggt
gtcaatccacctgcaccgttggatgcatttagatccactgagcaatgggatattttacgt
tgttctttgagacctatcattcaaaacagcgagctgaacgaccaagagaaatatgaagcc
attttggaaaactttagatcattagaaatgtttacacttttctacaactattatttcgca
gttacacctttagaacaggagattgcttccattattctttcagagagagattggaaagtt
tcgaaaaactgtgcaatgtggttcttaaggcagagtgagactaaatttgctaatgaactt
tgtgaagtggctgattacaaaattttcaaactggatgattggactgtgattgataggcta
aattttaaattggattatgcggctctaaagaatccatcactagttgccgattcacaatta
ccgaaggctcaagaaacggatgtattgagtcatggtcaacagctcttacaacagttgaaa
caaggtggtaaatcaagtattttggcttga
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