Zygosaccharomyces rouxii: ZYRO0E01606g
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Entry
ZYRO0E01606g CDS
T01118
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ZYRO0E01606g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zro03041
]
ZYRO0E01606g
03009 Ribosome biogenesis [BR:
zro03009
]
ZYRO0E01606g
Enzymes [BR:
zro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ZYRO0E01606g
Spliceosome [BR:
zro03041
]
Complex A
U2 snRNP components
U2 related factors
ZYRO0E01606g
Complex B
ZYRO0E01606g
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
ZYRO0E01606g
Ribosome biogenesis [BR:
zro03009
]
Eukaryotic type
90S particles
Helicases
ZYRO0E01606g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
SRP54
AAA_19
Flavi_DEAD
AAA_23
nSTAND3
ABC_tran
AAA_30
AAA_7
ResIII
Motif
Other DBs
NCBI-GeneID:
8204549
NCBI-ProteinID:
XP_002499016
UniProt:
C5E400
LinkDB
All DBs
Position
E:116792..119119
Genome browser
AA seq
775 aa
AA seq
DB search
MGTKRRLSEKAEHVSALESSVPERAAEIAEELNKKHPHQTEEKLVHHDLGEFNSMVRHHT
NASQAQKLEDGKVNPFTGRPFTAKYVDILKIRRELPVHAQRDEFLKIYQENQIMVFVGET
GSGKTTQIPQFVLFDEMPHLQNTQVACTQPRRVAAMSVAQRVAEELDVNLGEEVGYSIRF
ENKVSNKTILKYMTDGMLLREAMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVVVRR
PDLKLIVMSATLDAKKFQSYFHSAPLLAVPGRTFPVELYYTPEFQRDYLDSAIRTVLQIH
ATEGAGDVLLFLTGEDEIEDAVRKIQLEGDQLVREEGCGPLTVYPLYGSLPPHMQQRIFE
PAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISK
ASAQQRAGRAGRTRPGKCFRLYTEDAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLV
HFDFMDPPAPETMMRALEELNYLACLNDDGDLTPLGRLASQFPLDPMLAVMLIGSFEFHC
SQDILIIVAMLSVPSVFIRPTKDKKRADEAKNQFAHPDGDHITLLNVYYAFKSDEVYEYG
VQKWCRDNYLNYRSLAAADNIRVQLERIMVRYNLELNTTDYESPKYFDNIRKALASGFFM
QVAKKRSGGKGYITVKDNQDVLVHPSTVLGHDAEWVVYNEFVLTTKNYIRTVTSVRPEWL
IELAPAYYDIHSFQKGDVRYSIERVKERMEQMQELHNDKHKKKGKKEGKEKHKHT
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgggtactaaaagaagactatctgaaaaggcagaacacgtaagtgcgttagagagctct
gtgcctgaaagagcagcagagattgcagaggaattaaataaaaagcatccacaccaaaca
gaggagaaacttgtgcatcatgatctcggtgagtttaattctatggtacgtcatcataca
aatgcttcacaagcacaaaagctagaagacggcaaagttaatcccttcactggtagaccg
ttcactgccaagtatgtggatatcttgaagattagacgtgaattaccagtacatgcacag
agagatgaatttttgaaaatatatcaagagaaccaaattatggttttcgttggtgagaca
ggttctggtaagactacacagatcccacaatttgtgcttttcgatgagatgccacactta
cagaatacacaagttgcatgtacacaaccacgtcgtgttgctgccatgtcggtggctcaa
agagtagcagaagaattagatgttaacttgggtgaagaagttggttattccatcagattt
gaaaataaagtttccaataagactatccttaaatatatgaccgatggtatgcttttaaga
gaagctatggaggatcatgacttgaaacgttattcatgtatcatattggatgaagcccat
gaacgtactttggcaacagatattttgatgggtctgctgaagcaagttgtggtgagaaga
ccagatcttaagttaatcgtcatgtctgccactttagatgctaagaagtttcaatcatat
ttccacagtgcaccactacttgcggtcccaggtagaactttccctgtggaattgtactat
acaccagaatttcagagggactatctggattctgccattcgtaccgtcttacaaatccat
gctactgaaggagcaggtgatgtcctattgtttttaacaggtgaagacgagatcgaagat
gccgtaaggaaaattcaactagaaggtgatcaattggttagagaagaaggttgtggacct
ttaaccgtttaccccttgtacggttcactgccaccacatatgcaacaacgtatctttgaa
cctgcaccagaatcgcataacggtagaccaggtagaaaagttgtgatttccaccaacatt
gcagaaacttctttgaccattgatggtattgtttacgtggtagatccaggtttctcaaag
caaaaagtttacaacccaagaattcgtgtggaatctttgttggtgtcaccgatctcaaag
gcttctgctcaacagagagctggtcgtgctggtcgtacgagaccgggaaaatgctttaga
ttatacacagaggatgcgtttaagaaagaattgatcgaacagagttatccagaaatctta
cgttcaaatttgtcctcaacggttttggaattgaagaaattgggtattgatgatttagtg
cactttgatttcatggatccaccagctcctgaaactatgatgagagcattggaagaattg
aactatctagcatgtctaaacgatgatggtgatttaacaccattgggccgtttagcttca
cagttcccattagatcctatgcttgccgttatgctaattggatcatttgaatttcattgt
tcacaagatatcttgatcatcgtggccatgctttcagtcccaagtgtctttattcgtcca
acaaaggataagaaacgtgctgatgaagctaagaaccaatttgctcacccagacggtgat
catataacacttttgaacgtctattacgctttcaaatctgatgaagtttacgaatatggt
gtccaaaaatggtgtagggataattatttgaattacagatctctggctgctgctgataac
attagagtgcagctggaaagaatcatggttcgttacaatcttgaattaaacactacggat
tatgaatcccccaagtacttcgataacattagaaaggcgcttgcatcaggattctttatg
caggttgcaaagaagcgttctggtggtaaaggttacattaccgttaaggataaccaagat
gttctagtgcatccaagtacagtattgggacacgatgccgaatgggttgtctataacgaa
ttcgtcttaactacaaagaattatatcaggaccgtcacttcggtgagaccagaatggtta
attgaactagcacctgcttattacgatattcatagtttccaaaagggagatgtgaggtat
tcaattgaaagagtcaaggaaagaatggaacagatgcaagaattgcacaacgataaacac
aagaagaagggaaagaaagaaggaaaggagaaacacaagcatacttag
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