Zygosaccharomyces rouxii: ZYRO0F04488g
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Entry
ZYRO0F04488g CDS
T01118
Name
(RefSeq) linker nucleoporin NIC96
KO
K14309
nuclear pore complex protein Nup93
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
ZYRO0F04488g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zro03019
]
ZYRO0F04488g
Messenger RNA biogenesis [BR:
zro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
ZYRO0F04488g
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
8205151
NCBI-ProteinID:
XP_002497393
UniProt:
C5DXE9
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Position
F:378017..380578
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AA seq
853 aa
AA seq
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MSLKVDSMSSKTNKTQDVSLKGSAKVLNELIETSKNLPTTSSELGSIQLSVNEIRKRTHD
LRQKKDISSDHTKAHYLLAGSGLAIEDVDLSLKNLQSKQLLEQPVSKKQVEGELDTYLET
KKDENILSSIENLLSVAAKDFDNFVNQNLSLDWDQRKEEVRENFGILIQGKNHTDSTKNV
APLNPKLPTWGNQGSSILNSGETRLNVNENYAVREKFEKYAKIIYRFNNARQANQDFPLL
KELSQALANGGDLKNRQLLESSKILEGLKSNSDVVQNAKSYLQNQFLEYVDHLYKKNLSE
GLPTNINKIKSFIDSKLKNPNNTWKFNNLTFINGTPIWALIFYLLRAGLLQEALEVAVNN
KASFKKVEQSFLTYLKAYVSSKDHTLPVEFSARLHTEYSQHIKSSLDGDPFRLAVYKIIG
RCDLTRRNISFITLSVEDWLWIHFMLIKDDIADSDPVYERYSLSDFQNIIVSYGHTRFTN
YYSQVLILSGLYELAVEYAYSISEIDAVHLAIVMANQGLLKVDNDRSSSSGTDFITVKSN
QRKINFAKVLGNYTRSFKYSDPRIAAEYLILIALVATPEQVELCHEALRELVLETKEFTI
LLGKINRDGTRIPGVLEERQSLLHLKDEKEFLRKITEHAALKADEDGRVYDCLLLYQLSE
EYNIVITIVNSLLSDLLSNTDLDQPLVTMDENNETNPVLIAKKIVCIYIENLEISQKVQT
KNKETCIILLKLADARRAYQAKQWETTLAQIEELDLLPFSDEVSARRKAQDFTALNENIV
KNIPTLLVMVMSCISQLIAGLNQSDYQSVTKAQQVEALKNVSRNCMMYAGMVQYKMPRET
YSALIRLDIDCKV
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgaaggtggattcaatgtcttccaagactaataagactcaggatgtgtctttg
aaaggatctgcaaaggtactaaacgagttaattgagacctctaaaaatctacctactact
tcttcagaattaggttcgatccagttgagtgtgaatgaaattaggaagagaactcatgat
ttaagacaaaagaaagatattagctcagatcatacaaaggctcactacctcttagctgga
agtggattagctattgaagatgtggacctttcattgaaaaatttacaatccaagcaattg
ttagaacagccggtttctaagaagcaagtcgaaggtgaactggatacttatttggagact
aagaaggatgaaaacatcctttcctctattgaaaatcttttatcagtggcggccaaagat
ttcgacaattttgtaaaccaaaatttaagtttagattgggatcaacgtaaagaagaagtt
cgtgaaaattttggtattctcattcaaggtaagaaccatacagattctacaaagaatgtg
gcacctttgaatcccaagttacccacttggggtaatcaaggctctagtatcttgaacagt
ggagagacgaggttaaacgtcaacgaaaattatgccgttagagaaaaattcgaaaaatat
gccaagataatttaccgtttcaacaatgctagacaagccaatcaagactttccgcttttg
aaggaattgtcacaggcgcttgccaatggaggagacttgaaaaatcggcaattattggaa
agttctaaaattttagagggtttaaaatcaaattctgatgtggtgcaaaatgctaagagc
tatttgcaaaatcaatttttagaatatgtggatcatctttacaaaaagaatctaagcgaa
ggattaccaacaaacattaacaagataaaatcctttatcgattctaagctgaagaaccca
aataatacatggaagtttaacaacttgacctttattaatggtacacctatctgggctctg
atattctatctcttgagggctggactgttacaagaggcattagaagtcgccgtaaataat
aaggcaagcttcaagaaagtcgagcaatcgtttttgacttatctgaaggcttatgtgtcc
tctaaagatcatactcttcctgtggagttttctgctaggttgcataccgaatacagccag
cacatcaaaagctctctagacggagatccattcagattggcagtttacaaaattattgga
agatgcgatttgacaagaagaaacatttcttttatcactcttagcgttgaagactggcta
tggatccattttatgctgatcaaagatgatattgcggacagcgatccagtctacgaaagg
tacagtctgagcgactttcaaaacattattgtatcatatggtcatacaagattcactaat
tactattcgcaagtattaatcttgagtggtctttatgaattagcggttgagtatgcctac
tccatcagtgagattgatgctgttcacctagcaattgtcatggctaaccagggtctgtta
aaagtcgataatgatcgctctagcagtagtggaactgatttcatcacagttaagagcaac
cagaggaaaattaatttcgccaaagttttgggcaattacacaaggtcgttcaaatattcc
gatccaaggattgcagccgaatatttgatattaatagcgttggttgccacaccagaacaa
gtagaattatgccacgaagcactaagagaacttgttctagaaacaaaagaattcacgatt
ttactgggcaaaatcaacagagatggtacaagaatacctggtgttttagaagaacgtcaa
tccctattacatctaaaagatgagaaagaatttctgcgtaagattactgaacatgcagcc
ttgaaagccgatgaagacggtagagtttatgattgtttgttgttataccaactatccgaa
gagtacaacattgtgatcaccattgtcaacagtttactaagcgatctactcagtaacacc
gatttggatcaaccgctggtaactatggatgaaaacaatgagacaaaccccgtactaata
gcgaagaaaattgtttgcatttacattgagaatctagaaatttcgcaaaaagttcaaaca
aagaacaaggaaacatgtattatattattaaagcttgctgacgccagaagagcatatcaa
gcaaagcaatgggagactactttggcgcaaattgaagaactagatttattgcccttctca
gatgaagtttcagcaaggaggaaagctcaagattttactgccctcaacgaaaatattgtc
aagaatatccccactttactcgtcatggtaatgagttgtatttcacagttaatcgctggg
cttaaccaaagtgactaccaatccgtcacaaaggcacaacaggtggaagcactaaaaaat
gtttcgaggaattgcatgatgtacgccggtatggttcaatacaagatgcccagggagacc
tacagcgcattgataagattagatattgattgtaaagtatga
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