Zygosaccharomyces rouxii: ZYRO0F05918g
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Entry
ZYRO0F05918g CDS
T01118
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03020
RNA polymerase
zro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ZYRO0F05918g
09124 Replication and repair
03420 Nucleotide excision repair
ZYRO0F05918g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zro03021
]
ZYRO0F05918g
03400 DNA repair and recombination proteins [BR:
zro03400
]
ZYRO0F05918g
Enzymes [BR:
zro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ZYRO0F05918g
Transcription machinery [BR:
zro03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
ZYRO0F05918g
DNA repair and recombination proteins [BR:
zro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
ZYRO0F05918g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
DUF4123
Motif
Other DBs
NCBI-GeneID:
8205215
NCBI-ProteinID:
XP_002497454
UniProt:
C5DXL0
LinkDB
All DBs
Position
F:487056..492290
Genome browser
AA seq
1744 aa
AA seq
DB search
MVGQQYSSAPLRTVKEVQFGLFSPEEICAISVAKIKFPETMDETQTRAKIGGLNDPRLGS
IDRSLKCQTCQEGMNECPGHFGHIELAKPVFHIGFISKIKKVCECVCMHCGKLLLDEHNE
QMRQAIKIKDSKKRFNAVWSLCKAKMICDTDVPSDEDPTQLISRGGCGNAQPTIRRDGLK
LVGSWKKDKNSGDNEEPEQRVLNMEEILNIFKHISPEDSWKLGFNEEFARPEWMILTVLP
VPPPPVRPSISFNESQRGEDDLTFKLADILKANISLETLEHNGAPHHTIEEAESLLQFHV
ATYMDNDIAGQPQALQKSGRPVKSIRARLKGKEGRIRGNLMGKRVDFSARTVISGDPNLD
LDQVGVPKSIAKTLTYPEVVTPYNIDRLTMLVRNGPNEHPGAKYVIRDNGDRIDLRYSKR
AGDIQLQYGWKVERHVIDNDPVLFNRQPSLHKMSMMAHKVKVMPYSTFRLNLSVTSPYNA
DFDGDEMNLHVPQSEETRAELSQLCAVPQQIVSPQSNKPCMGVVQDTLCGIRKLTLRDNF
IELGQVLNMLYWVPDWDGVIPTPAILKPKPLWTGKQLLSVAIPKGIHLQRFDEGTTLLSP
KDNGMLVIDGQIIFGVVDKKTVGSSSGGLIHVVTREKGPQVCATLFSNIQKVVNYWFLHC
GFSTGIGDTIADGQTMRQITEAIAEAKVKVEDVTKEAQANLLTAKHGMTLRESFEDNVVR
YLNEARDKAGRLAEVNLNDTNFVKQMVSAGSKGSFINIAQMSACVGQQSVEGKRIAFGFV
DRTLPHFSKDDYSPESKGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTAETGYIQRR
LVKALEDIMVHYDGTTRNSLGNIIQFIYGEDGMDAAHIEKQAVETIGGSDRNFERRYRID
LLNPDYSLDPSLLESGSEIIGDLKLQSLLDEEYKQLVEDRKFLRRIFVDGEVNWPLPVNI
RRIIQNAQQTFRIDRSKPSDVTIRDVVWGVKELQERLLVVRGNSRIIKEAQEDAITLFCC
LMRSRLASRRVIQEYRLTKQAFEWVLNNIEVQFLRSVVHPGEMVGVLAAQSIGEPATQMT
LNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSLTAYLEPDYAADQEKAKLIRSVIEH
TTLKSVTVASEIYYDPDPRSTAIPEDEEIIQLHFSLLDDETEKSLAQQSPWLLRLELDRA
AMNDKDLTMGQVGEKIKETFKNDLFVIWSEDNAEQLIIRCRVVRPKSMDLETEAEEDHML
KKIENTMLENITLRGVENIERVVMMKYDRKVPSETGEYQKIPEWVLETDGVNLSEVMTVP
GVDASRIYTNSFIDIMEVLGIEAGRAALYKEVFNVIASDGSYVNYRHMALLVDVMTTQGG
LTSVTRHGFNRSNTGALMRCSFEETVEILFEAGASAELDDCRGVSENVILGQMAPIGTGA
FDVMIDEESLVKYMPEQKITELVDGQDGGATPYSNENGLINTEVDVKDELMFSPLVDSGS
TDAMAGGFTAYGGGSASFGSYGDAPISPGFGGVSSPGFSPSSPTYSPTSPSYSPTSPSYS
PPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP
SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPGSPTYSPSSPKQDDREKD
GNHS
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atggttggtcaacagtattctagtgctcctctacgtaccgtcaaggaagtgcaatttggt
cttttttctccagaggaaatatgtgctatcagtgtggctaaaattaaattcccagagacc
atggatgagactcaaactagagccaaaattggcgggctaaatgacccaagactgggatct
atcgaccgtagtttgaaatgtcagacctgtcaggaaggtatgaacgaatgtcctggccac
tttggtcacattgaactggcaaagccagtttttcacattggttttatatctaagattaag
aaggtctgtgaatgtgtttgtatgcactgtggtaaactactgttagatgaacataatgaa
cagatgcgtcaagcaataaagattaaagattctaagaaaagatttaatgctgtgtggagt
ctgtgtaaagctaagatgatttgtgataccgatgtaccttcagatgaagatccaactcag
ttaatctcaagaggtggttgcggtaatgcgcaaccaacaattagaagggatgggttgaag
cttgtgggtagctggaaaaaggataaaaatagtggtgataatgaagaacctgaacaaaga
gttttaaatatggaggaaattcttaatatcttcaaacatatttctcccgaggattcctgg
aagttaggtttcaatgaggagttcgctaggccagaatggatgattctaacagttttaccg
gttccaccaccacctgtacgtccatccatttcttttaacgaatctcaaagaggtgaagat
gacttgaccttcaagctagcggatattttgaaggcaaatataagtttagaaactttagaa
cataacggtgctcctcatcacactatagaagaagctgaaagtttacttcaattccatgtg
gctacctatatggataacgatatcgcaggtcaaccacaagctttacagaaatccggacgt
cctgttaaatctatacgtgccagattgaagggtaaggaaggtcgtatcagaggtaactta
atgggtaagcgtgtagatttctctgcaagaactgtgatttctggtgacccaaacttagat
ttggatcaagtgggtgttccaaagtcgattgcgaagaccttgacgtaccctgaagtcgtc
acgccttataatatcgatcgtctgacaatgcttgtacgtaacggtcctaacgaacatcca
ggtgccaaatatgtgatccgtgacaatggtgatcgtattgatctaaggtacagtaagaga
gcgggtgacatccagttacaatacggttggaaggtggagcgtcatgttattgataatgat
ccagttttgttcaaccgtcaaccttctcttcacaaaatgtcaatgatggcccacaaggtt
aaagtgatgccgtattcgacattcagattaaacttgtctgtcacttctccatacaatgcc
gattttgatggtgatgaaatgaacttacacgttccacaatctgaagaaacaagggccgag
ctttcgcagttgtgtgcagtgccccagcagattgtatctcctcaatcaaataaaccttgt
atgggtgttgtgcaagatactctatgtggtattcgtaaattgacgttaagagacaacttc
atcgagttgggccaagtattaaatatgctttattgggttccagattgggatggtgtgatc
cctactccagcaattttaaagcctaaaccactatggacaggtaagcaattattgtctgtg
gctattcctaaaggtatccacttgcagcgattcgatgaaggtactacgctgttgtccccc
aaggacaacggtatgctggtcattgatggtcagatcatctttggtgtcgtggacaagaaa
accgttggttcttcaagtggtggtctaatccacgtcgtgaccagagaaaagggtcctcaa
gtgtgtgccactttatttagtaacattcaaaaagtcgtcaactactggttcctgcattgt
ggtttttctactggtattggtgataccattgctgatggacagaccatgaggcaaattact
gaagctatcgcggaagccaaggtaaaggtggaggatgttaccaaggaggctcaagcaaac
ttgcttactgccaaacacggtatgactcttcgtgaatcgtttgaagataatgtggtgcgt
tatctgaacgaggcaagagataaagccggtcgtctggcagaagtcaacttgaatgatacg
aattttgtgaaacagatggtaagtgcgggttcaaagggttctttcattaacattgcacag
atgtctgcatgtgtgggacaacagtctgttgaaggtaagcgtattgccttcggttttgtt
gaccgtactctaccccatttttcaaaggacgattattcacctgaatctaaaggttttgtt
gaaaactcttatttaagaggtctaacccctcaagagttctttttccatgctatgggtggt
cgtgaaggtttgattgatactgccgtgaagacagccgaaacgggttatattcaacgtcgt
ttggtcaaggctctggaggatattatggttcattacgatggtaccaccagaaactcattg
ggtaatatcattcaattcatctacggtgaagacggtatggatgcagctcacatagaaaag
caagccgtggagactattggtggttctgataggaactttgagaggagatacagaatagat
cttctcaacccagattactctctggatccatctttgctagaatctggttctgaaattatt
ggtgacttgaaattacagtcattgttggatgaagaatacaagcagctagtagaggaccgt
aagtttttgagacgtatcttcgtagacggtgaagtcaactggcctcttcctgtgaatatc
agacgtatcatacaaaatgcccaacagacattcagaattgaccgttctaaaccatcagat
gtgacaattagagatgttgtctggggtgtcaaagaactgcaagaaagactgcttgttgta
aggggtaacagtaggatcatcaaggaagctcaagaagatgctattacattattctgttgt
ttgatgcgttctcgtcttgcctcacgtagggtgattcaggaatacagattaaccaagcag
gcatttgaatgggttttgaacaatattgaagttcagttcctacgttcggttgttcaccca
ggtgaaatggtcggggtgctggcagctcaatccatcggtgaacctgccactcaaatgact
ttaaacactttccactttgccggtgttgcctccaagaaggtcacttctggtgtgcctcgt
ttaaaggaaattttgaacgttgcaaaaaacatgaagactccatcattaacagcctattta
gaaccggactatgctgctgaccaagaaaaagctaaattgatcagatcagttattgaacac
acaactttgaagagtgtcacagttgcttcggaaatttactatgatcctgatccacgttca
actgcaattcctgaagatgaggaaattattcaattgcatttctccctgctcgatgatgag
actgaaaagtccttggctcaacaatctccatggctattacgtcttgaactagatcgtgca
gctatgaacgataaagatttgaccatgggtcaagtgggtgaaaagatcaaggaaaccttt
aagaatgatcttttcgtcatttggtctgaagataacgctgagcaattgatcatccgttgt
cgtgtggttcgtcctaagtctatggacttggagacagaggccgaggaagatcatatgttg
aagaaaatcgaaaatacgatgttggaaaacattactttacgtggtgttgaaaacattgaa
cgtgttgttatgatgaaatacgataggaaggtaccaagtgagaccggtgaatatcagaag
attcctgaatgggttctggaaactgatggtgttaacttatctgaagttatgactgtacct
ggtgtcgatgccagcagaatttataccaactcattcatcgatatcatggaagttctcgga
attgaggcaggtcgtgccgcattgtacaaagaagttttcaatgttattgcttctgacggt
tcttatgttaactacagacatatggctcttttggtcgatgtcatgaccactcaaggtgga
ctaacatctgtgactcgtcacggtttcaacagatctaacactggtgcattaatgagatgc
tctttcgaagaaactgtggaaattttgttcgaggctggtgcttctgcagaattggatgac
tgtcgcggtgtttctgaaaacgttattttgggacaaatggctccaattggtactggtgcg
ttcgatgtcatgattgatgaagaatctttggttaaatacatgccagaacagaagattaca
gagctagtggacggacaagacggcggtgccactccttacagcaatgaaaacggcttgatc
aacaccgaagttgacgtgaaggacgagttgatgttttctccattggtggactccggttct
acggatgcaatggctggtgggttcacggcatacggcggcggatctgcttcatttggctct
tacggtgatgcaccaatctctcctggttttggcggtgtatcctcacccggattttcacct
tcttctccaacctattcgccaacatcaccatcatattcaccaacatcaccatcatactct
cctccttcaccaaactacagtccaacttcgccaagttattcaccaacttcgccaagttac
tccccaacttcaccatcgtactcaccaacctcgccaagctacagtccaacttcgccaagt
tattccccaacttcgccaagttactccccaacttctccaagttactccccaacttcacca
agctatagcccaacatcaccaagttatagcccaacatctccatcatattcaccaacctcg
ccatcatactctcctacatcaccaagctatagtccaacatcaccaagctatagtccaaca
tcaccatcatactcaccaacatcaccgaactatagtcctacgtcaccaagctatagtcca
acatcaccaagctatagcccaacttcaccatcgtattcaccaacatcaccaagctatagc
ccaacatcaccaagctatagtccaacatcaccaagctactcaccaacatcaccaaactat
agcccaggttccccaacttattcaccaagctcaccaaagcaagatgatagagaaaaagat
ggaaaccactcttaa
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integrated database retrieval system
