Zygosaccharomyces rouxii: ZYRO0F06446g
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Entry
ZYRO0F06446g CDS
T01118
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03030
DNA replication
zro03410
Base excision repair
zro03420
Nucleotide excision repair
zro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ZYRO0F06446g
03410 Base excision repair
ZYRO0F06446g
03420 Nucleotide excision repair
ZYRO0F06446g
03430 Mismatch repair
ZYRO0F06446g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zro03032
]
ZYRO0F06446g
03400 DNA repair and recombination proteins [BR:
zro03400
]
ZYRO0F06446g
DNA replication proteins [BR:
zro03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
ZYRO0F06446g
DNA repair and recombination proteins [BR:
zro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
ZYRO0F06446g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
RuvB_N
Rad17
AAA_22
AAA_17
AAA_16
AAA_assoc_2
AAA_33
RNA_helicase
RCF1-5-like_lid
AAA_24
AAA_14
AAA_5
AAA_28
nSTAND3
AAA_18
Motif
Other DBs
NCBI-GeneID:
8205239
NCBI-ProteinID:
XP_002497478
UniProt:
C5DXN4
LinkDB
All DBs
Position
F:533651..536176
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AA seq
841 aa
AA seq
DB search
MVNITDFFGKDKKTGGGRRLRPSSSTSSSTAAKKTEPEVIDLDEPESEATVKKEEKKKSS
EPVKPKANSKPASSGSTGSTNPVTAQDVLAKIPAVDLSNVHVKENVQFDFRNNNNGNDQD
VPMGSADDFPEGKPNCLLGLTLVFTGTLPNIERGVAESIAKRYGARITKSISSKTSAVVL
GEEAGPKKVDTIKKLGIKAIDEEGFKQLILGMPAEGGDGALAEKARKKIEEQEKQAQKEA
DEMAKKEKERVQRIEAAQKSGESAKQNDLVHEQNKLWTVKYAPTNLQQICGNKGAVTKLK
SWLTNWDESKKNGFKKSGRDGSGVFRAAMLYGPPGIGKTTAAHLVANELGYDVLEKNASD
VRSKSLLNVGVKNALDNMSVMGFFENKHNAQDDNSKKFVIVMDEVDGMSGGDRGGVGQLA
QFCRKTLTPMILICNERNIPKMRPFDRTCLDIQFRRPDANSIKARLMTIAVRERFKLDPN
IVDKLVQATRGDIRQIINLLSTVSKTTKTINHENITEISQAWEKEIALKPFDIAHKLLDG
RIYTDAGSQTFNLNDKIALYFDDFDFAPLMVQENYVNTRPSLLQSGETHLEAIAKAADSI
SMSNLVETKIRSSEQLWSLLPLHAVLSSVYPASKIAGQMAGRINFTSWLGQNSKTNKYYR
LLQELQYHTRLSTSTNKVGLRLEYLPALKKRLLDPISKEGSEGIDAVIKVMDDYYLTKED
WDTIMEFLIGPASTDAALKKIPTPVKTAFTRKYNSTTHPVAIYRAGTTTMASSASADQKP
DFEDIIDADDAAPPAENEEPDEDADLKKDKLIKQKAKPSKRKATKPASGKESAPKRRRTK
T
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggttaatatcacagacttctttggtaaggataagaagacaggcggtggtagacgttta
agaccgtcatcatcaacatcatcgtcaacagctgctaaaaaaactgaaccagaggttatt
gatttggatgagcctgaatctgaagcaactgtgaagaaagaagagaagaagaagtcttct
gagcccgtgaaacccaaggctaattccaaaccggcttcatctggcagtaccggctctact
aatccagtcacggcccaagatgtactggcaaagatacctgcagttgatctttccaatgtt
catgtcaaggaaaatgttcaattcgatttcagaaacaataacaacggtaatgatcaagat
gttcctatgggaagtgccgatgatttcccggagggtaaacctaattgtctcttgggattg
actttagtctttactgggacactgccaaatattgaaagaggtgtagctgaatcaatagcg
aaaaggtatggtgctcgtataaccaaatcaatttccagcaagacatctgcagtagtatta
ggtgaagaagcaggacctaaaaaagtggatactattaaaaaattgggcattaaggcaatt
gatgaggaaggattcaagcaactgatattaggtatgccagcagagggtggtgatggggca
cttgcagaaaaagcacgtaaaaagatcgaagaacaagagaaacaggcacaaaaggaagcc
gatgagatggctaaaaaggagaaggaaagagttcaaagaatcgaagctgctcagaaatca
ggtgagagtgctaaacagaatgatttggttcatgaacaaaataagttgtggactgtcaaa
tatgcaccaacgaatttacaacaaatatgtggtaataaaggtgctgttacaaagttaaag
agttggttaaccaactgggatgagagtaagaaaaatggatttaaaaaatcaggtagagat
ggctcgggtgtgtttagagcagctatgctttatggtcctccgggtattggtaagacgacg
gcggcccatctagttgcaaacgaacttggatacgacgttttagaaaaaaatgcatctgat
gtccgttcaaaatcgctattgaatgttggcgtgaagaatgcattagataacatgtctgtg
atggggtttttcgaaaacaagcacaacgctcaagatgataacagtaaaaagtttgttatt
gttatggatgaagttgatggtatgagcggtggtgatagaggtggggtgggtcaattggct
caattctgccgtaagactttaacacctatgattctaatttgtaatgaacgcaatataccc
aaaatgagaccatttgatagaacttgtttggatattcaattcagaagaccggatgccaat
agtataaaggccagattgatgaccattgccgtaagagaacgttttaaacttgaccctaat
attgtggataagctggtacaggctactcgtggtgacattagacagatcattaacctgctg
tctacggtatcaaaaacaacaaagacgattaatcatgaaaatatcacggagatatcacag
gcatgggagaaagaaattgcattgaaaccatttgatattgcgcataaacttctcgatggt
cgtatatatacagatgctggatcccagacatttaacttgaacgataagattgcattatat
ttcgatgattttgattttgcaccattgatggtacaggaaaactatgtgaatactaggcct
tcccttttacaaagtggtgaaactcatttggaagctatagctaaagccgctgacagtatt
tcaatgtcgaatttggtagaaactaaaattcgcagtagtgaacaactgtggagtttactt
ccattacatgcagtgctttcgtctgtttatcccgcttccaaaattgctggccaaatggcg
ggcagaatcaatttcaccagttggttaggtcaaaattctaagactaacaaatactaccga
ttattgcaagaactacaatatcatactagattgagcacttcgaccaataaagttggctta
agattagagtacttgccagctttgaaaaagaggttattggatccaatttccaaggaaggc
tctgagggtatcgatgctgtgattaaagttatggacgattattacctgacaaaagaggat
tgggatacgataatggaattcttaattggacctgctagtacagatgctgcattgaagaag
attcctacccctgtcaaaacagcatttacaagaaaatacaacagcacgactcatcccgtg
gcaatctatagagctggtacgacaactatggcatcatcagcttctgcagaccagaagccc
gattttgaagatataattgacgccgacgatgctgcaccaccagcagaaaatgaggagcct
gatgaagatgcagatttgaagaaggataaactgattaaacaaaaggcaaaaccttccaag
agaaaggcgacaaaacctgcatcgggtaaagaatctgcaccaaagagaaggagaacgaaa
acttga
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