Zygosaccharomyces rouxii: ZYRO0F07920g
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Entry
ZYRO0F07920g CDS
T01118
Name
(RefSeq) exosome non-catalytic core subunit RRP42
KO
K12589
exosome complex component RRP42
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ZYRO0F07920g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zro03019
]
ZYRO0F07920g
Messenger RNA biogenesis [BR:
zro03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
ZYRO0F07920g
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
ZYRO0F07920g
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
8205303
NCBI-ProteinID:
XP_002497541
UniProt:
C5DXU7
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Position
F:640110..640907
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AA seq
265 aa
AA seq
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MPLSIAEKSYLYDSLSSNAGTRPDGRLPHQFRPLEVYTDFLPSSNGSSRIIASDSSECIV
SVKANVVDHQVQQDLFQVEVDIAGQRDDSSEVETLTSLLNRVLESRGSIDASKLKLTRKY
SYKLFIDVLVISSSSHPVSLISFTIFSALNSTYLPKIISSFDDLEVEELPTFHDADMVKL
DVSPPLVFILAVVGENVFMDAAANESEVADNGLIITWSGDKIVAPIRTVALNNSDVKGFN
PLVLQRGIQMVQQYAGDVVRAFANL
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcctctttctattgctgaaaaatcttacctttacgattcattgtcctctaatgctggt
acaagacctgatggtagattacctcatcagtttagacctttagaagtctatactgatttt
ttaccgagttcaaatggatcttcgagaatcattgcaagtgatagtagcgagtgtattgta
agtgttaaggcaaatgttgtagatcatcaggttcaacaagatctcttccaagtagaagtt
gacattgcaggtcaaagagacgattcatctgaagtggaaactttgacatcacttttaaac
agagtactagaaagccgtggtagtattgacgcttcaaaattaaaactgactagaaaatac
agctataaacttttcatcgatgtcttagtcatatcctcaagctcacatccagtttcacta
atatcttttaccatattttctgcgctaaattccacttatctaccgaagatcatctccagt
tttgacgatttggaagttgaagaattgcccactttccacgatgccgacatggttaaacta
gatgtaagtccaccattggtattcattctagcagttgttggtgagaatgtctttatggat
gcagccgctaatgaaagtgaagtcgctgataatggattaatcataacgtggtcaggcgac
aaaattgttgcacctataaggactgttgcgttgaataattcagatgtgaaagggtttaac
ccattggtattgcaaagaggtattcaaatggttcaacaatatgcaggagacgttgtacga
gcctttgccaatctatga
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