Zygosaccharomyces rouxii: ZYRO0F10934g
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Entry
ZYRO0F10934g CDS
T01118
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase DED1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
zro
Zygosaccharomyces rouxii
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zro03019
]
ZYRO0F10934g
03041 Spliceosome [BR:
zro03041
]
ZYRO0F10934g
03036 Chromosome and associated proteins [BR:
zro03036
]
ZYRO0F10934g
Enzymes [BR:
zro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ZYRO0F10934g
Messenger RNA biogenesis [BR:
zro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
ZYRO0F10934g
mRNA cycle factors
Common to processing body (P body) and stress granule
ZYRO0F10934g
Spliceosome [BR:
zro03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
ZYRO0F10934g
Chromosome and associated proteins [BR:
zro03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
ZYRO0F10934g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
8205439
NCBI-ProteinID:
XP_002497673
UniProt:
C5DY79
LinkDB
All DBs
Position
F:890412..892223
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AA seq
603 aa
AA seq
DB search
MADLSNQVENLNIDGNASSYVPPHLRNSSRRPRNDGEGSSFNNKGSFFGRGRGGGFSSNR
GGRGGGSGGGFRPAGTGRWINGKHVPTERNEKLELQLFGATGDPNFQSSGINFDNYDDIP
VEASGENVPEPVTEFTSPPLDELLLENIKFAHFVKPTPVQKYSIPIVANKRDLMACAQTG
SGKTGGFLFPVLSESFFTGPSEIPEAARSSYMRKAFPTAVVLAPTRELATQIFDEAKKFT
YRSWVRPTVVYGGSDVGSQMRDLDRGCDLLVATPGRLNDLLERGKISLAKVKYLVLDEAD
RMLDMGFEPQIRNIVEGCDMPGVDQRQTLMFSATFPVDIQHLARDFLSDYIFLSVGRVGS
TSENITQRVLYVEDEDKKSALLDLLSASSGGLTLIFVETKRMADQLTDFLIMQNFRATAI
HGDRTQSERERALGSFKTGKADLLVATAVAARGLDIPNVTHVINYDLPGDVDDYVHRIGR
TGRAGNTGLATAFLNRGNKNVVKGLIEILSEANQEVPSFLNDLSRESAFGSRGGRGGGGF
SNNRSFGTRDYRKQGTGSFGASRGGGGSLGGSFRGGGNSGSSWGGGRSSNWDSFGSAGGN
SWW
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttatcaaaccaagtagaaaatttgaatatcgacggtaatgcatcgtcttat
gtacctccacatttgaggaacagcagcagacgtcctagaaatgacggtgaaggctcttca
ttcaataacaaaggtagtttctttggacgtggacgtggtggcggattttctagtaaccgt
ggtggccgtggtggtggctctggtggcggttttagaccagcaggtactggtagatggatt
aatggtaagcacgttccaactgaaagaaatgaaaaattagaattacaattatttggggct
actggtgatccaaatttccaatcatctggtattaattttgataattacgatgacattcca
gtggaagcatctggtgaaaatgttcctgagccggtgacggaatttaccagtccaccatta
gatgaattgttgttagaaaatattaagtttgctcactttgttaaaccaactcctgtgcaa
aagtattctattcctatcgttgccaacaagagagatttaatggcatgtgcccaaactggt
tccggtaagactggtgggtttttgttcccagttttgtctgaatcatttttcactggtccc
tctgaaattcctgaagctgctagaagctcttatatgagaaaggctttcccaactgcagtt
gttttggccccaaccagagaattagcaactcaaattttcgatgaagctaagaaatttacc
tatagatcctgggttagaccaactgttgtttacggtggtagtgacgttggttctcaaatg
agagacttggaccgtggttgtgatttgttagtggcaactcctggtcgtctaaatgatctt
ttggaacgtggtaaaatttctttggccaaggttaagtatttggtcttagatgaagctgat
agaatgttggatatgggtttcgaacctcagattagaaatatcgtggaaggttgtgacatg
ccaggtgtggaccaaagacaaactctgatgttttcagctactttcccagttgacattcag
catttggcccgtgatttcttgagtgattacatctttttatcggtcggtagagttggttcc
acttccgaaaacattacccaaagagtgttgtatgtggaagatgaagacaagaagtctgca
cttttggatctattgtctgcttccagtggtggattgactttgatttttgtggagacaaag
agaatggccgatcaattgacagatttcctcattatgcaaaacttcagagctactgctatt
cacggtgatcgtactcaatctgaacgtgaaagagctttgggttctttcaagaccggtaaa
gctgatttgctagtggctaccgctgtggctgctagaggtttggatattccaaatgtcacc
cacgttattaactatgatttgccaggtgatgttgatgattatgttcacagaatcggtaga
actggtcgtgctggtaatactggtttagctactgcatttttgaacagaggtaacaagaat
gtcgtgaaaggtttaatcgaaattttgtctgaagctaatcaagaagttccatcgttctta
aacgatctatcaagagaatccgctttcggctctcgtggtggtagaggcggtggcggtttc
tccaataaccgttcattcggtacaagagattaccgtaaacaaggaaccggttccttcggt
gcctcccgtggtggtggcggtagcttaggtggctccttccgtggtggcggcaacagtggc
agctcctggggaggtggcagatcttctaattgggattctttcggttctgctggtggtaac
tcctggtggtaa
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