Zygosaccharomyces rouxii: ZYRO0F12914g
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Entry
ZYRO0F12914g CDS
T01118
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03030
DNA replication
zro03410
Base excision repair
zro03420
Nucleotide excision repair
zro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ZYRO0F12914g
03410 Base excision repair
ZYRO0F12914g
03420 Nucleotide excision repair
ZYRO0F12914g
03430 Mismatch repair
ZYRO0F12914g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zro03032
]
ZYRO0F12914g
03036 Chromosome and associated proteins [BR:
zro03036
]
ZYRO0F12914g
03400 DNA repair and recombination proteins [BR:
zro03400
]
ZYRO0F12914g
DNA replication proteins [BR:
zro03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
ZYRO0F12914g
DNA Replication Termination Factors
ELG1-RFC complex
ZYRO0F12914g
Chromosome and associated proteins [BR:
zro03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
ZYRO0F12914g
DNA repair and recombination proteins [BR:
zro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
ZYRO0F12914g
Check point factors
HRAD17(Rad24)-RFC complex
ZYRO0F12914g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
AAA_22
Rad17
AAA_assoc_2
AAA_16
DNAX_ATPase_lid
NAD_binding_6
Rep_fac_C
AAA_27
AAA_24
Motif
Other DBs
NCBI-GeneID:
8205529
NCBI-ProteinID:
XP_002497762
UniProt:
C5DYG8
LinkDB
All DBs
Position
F:1054081..1055139
Genome browser
AA seq
352 aa
AA seq
DB search
MSLWVDKYRPRSLDTLSHNGHLTSVLQSISQQPRDLPHLLLYGPNGSGKKTRCMALLESI
FGQGVYKMKIDVRQFVTPSNRKLDLNVVSSAYHLEITPSDMGINDRIVIQQLLKEVAQME
QVDFQESQDGLAHRYKCVVINEADSLTRDAQAALRRTMEKYSRNVRLIMLCDSVSSIISP
IKSRCFMVRCPAPPNDETVNILNYVASKEKVQLESDEVLKVIAQESEGNLRKALLMLESM
ALCNEMQLKKSTPIIKPDWESVISKLATKIQKEKSVGCLVECRSFLYDLLAHCIPARTIL
QELTFALLRNSSNEKAKIAILQTSSIFDERLSLGNKPIYHLEGFVARAMCSM
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgtgggtcgataagtaccgtcctaggtctttagatactttgagtcataatgga
catttaaccagtgttttacaatctatatcacaacaaccgagagacttaccacatctactt
ttatatggtcctaatgggagtggtaaaaaaacgagatgtatggccttgttggagtcgata
tttggccaaggtgtttataaaatgaagatcgatgtgaggcagtttgtgacaccttcaaac
aggaaattagatttgaatgttgtaagttctgcatatcatttggagatcacacctagtgat
atggggataaacgatagaatagtgattcaacagctgctaaaagaggttgcacagatggaa
caagtggacttccaagagtctcaagatgggctagctcaccgttacaagtgcgttgtaatt
aatgaggcagactctttgacaagagatgcacaggcggcattgagacgtacgatggaaaaa
tattcaagaaatgttcgtttgatcatgttatgtgatagtgtatcttcgattatttcgccg
ataaaatcaagatgtttcatggtgagatgccctgcacctcctaatgatgaaactgtgaac
atcttgaactacgttgcctctaaggagaaagttcaactggaatctgatgaagtgttaaaa
gtaattgctcaagaatctgaaggtaatcttcgtaaagcattattgatgttggaatcgatg
gcattatgcaacgagatgcaattaaagaagagtaccccaattataaaacctgattgggaa
tccgtcatttccaaactggcaacaaagattcaaaaagaaaaatctgttggatgtttagtg
gagtgtcgatcctttctctatgatcttctggcacattgcattccagcaagaaccatttta
caagaattgacatttgcacttttacggaattctagtaatgaaaaggccaaaattgccatt
ttacaaacttcaagcatttttgatgaaaggttatcactaggaaataaacccatctatcat
ttagaaggtttcgttgctagagccatgtgttccatgtag
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