Zygosaccharomyces rouxii: ZYRO0G11462g
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Entry
ZYRO0G11462g CDS
T01118
Name
(RefSeq) U4/U6-U5 snRNP complex subunit LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03018
RNA degradation
zro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ZYRO0G11462g
09123 Folding, sorting and degradation
03018 RNA degradation
ZYRO0G11462g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zro03019
]
ZYRO0G11462g
03041 Spliceosome [BR:
zro03041
]
ZYRO0G11462g
Messenger RNA biogenesis [BR:
zro03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
ZYRO0G11462g
mRNA degradation factors
5'-3' decay
Lsm complex
ZYRO0G11462g
Spliceosome [BR:
zro03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
ZYRO0G11462g
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF3255
Motif
Other DBs
NCBI-GeneID:
8206298
NCBI-ProteinID:
XP_002498487
UniProt:
C5E0C0
LinkDB
All DBs
Position
G:complement(912593..912904)
Genome browser
AA seq
103 aa
AA seq
DB search
MSPLLKDYLHRRVLVITTAGDCIVATLEGFDKNTNVVISDVVDRCTLRPMAMAQAVRGSE
IVAMGPIDDAPTGTVDPLKDTKNKIPNEHLIWEKVGQRKLYRH
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccactactcaaagactacttgcacaggcgggtcctggtaatcacaacagctggt
gattgtatagtggctactttagaaggatttgataagaatacgaacgttgttataagtgat
gttgtagatagatgtacgctgaggccaatggcgatggctcaggcagttcgtggtagtgaa
atagtagctatgggacctatagatgatgcaccaactggtactgttgatccactcaaggat
acaaagaataagatccctaatgagcatctgatatgggagaaagtcggtcaaagaaagttg
tatagacattaa
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