KEGG   Zygosaccharomyces rouxii: ZYRO0G20152g
Entry
ZYRO0G20152g      CDS       T01118                                 
Name
(RefSeq) 40S ribosomal protein RACK1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
zro  Zygosaccharomyces rouxii
Pathway
zro03010  Ribosome
Brite
KEGG Orthology (KO) [BR:zro00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    ZYRO0G20152g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zro03019]
    ZYRO0G20152g
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zro04147]
    ZYRO0G20152g
Messenger RNA biogenesis [BR:zro03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     ZYRO0G20152g
Exosome [BR:zro04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   ZYRO0G20152g
  Exosomal proteins of colorectal cancer cells
   ZYRO0G20152g
  Exosomal proteins of bladder cancer cells
   ZYRO0G20152g
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_TEP1_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML_2 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd DSE1_N Beta-prop_SPT8 TRM82_WD NBCH_WD40 Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_WDR41 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_EIPR1 Beta-prop_SCAP WDR90_beta-prop_4th ANAPC4_WD40 ASA1 WD40_MABP1-WDR62_1st Beta-prop_WDR75_2nd CFAP251_N Beta-prop_DCAF4 Beta-prop_Vps41 PAC11 Beta-prop_Nup120_160 eIF2A Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 Beta-prop_NWD2_C Ge1_WD40 Beta-prop_NOL10_N Tricorn_2nd TP_0598_N Beta-prop_VPS8 DUF5710
Other DBs
NCBI-GeneID: 8206688
NCBI-ProteinID: XP_002498854
UniProt: C5E1D7
LinkDB
Position
G:complement(join(1669233..1669655,1669872..1670408))
AA seq 319 aa
MSSAEFLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDKQYGVPVRS
FQGHNHIVQDCSLTADGAYALSASWDKTLRLWDVATGQTYQRFVGHKSDVMSVAIDRKAS
MIISGSRDRTVKVWTIRGQCLATMLGHNDWVSQVRIAPTEDANDDTVTVISAGMDKMVKA
WNVNQFQIEADFIGHNNYVNTITASPDGSLVASAGKDGEIMLWNLADKVPMYTLSAQDEV
FALAFSPNRYWLSAATSSGIKIFCLDPKYLVDELKPEFAGYTKASEPHAVSLAWSADGQT
LFAGYTDNVIRVWQVMTAH
NT seq 960 nt   +upstreamnt  +downstreamnt
atgtcttctgctgaatttttggtccttagaggtactttggaaggtcacaacggttgggtc
acttcattggccacttccgctggtcaaccaaacttgttgttgtccgcttcccgtgataaa
actttgatctcctggaaattgactggtgatgacaagcaatacggtgtcccagttagatct
ttccaaggtcacaaccacattgttcaagactgttccttgaccgctgacggtgcttacgct
ttgtccgcctcttgggataagactttgagactatgggatgtcgccactggtcaaacttac
caaagattcgtcggtcacaagtctgatgttatgtctgttgccattgacagaaaggcttcc
atgatcatctctggttctcgtgacagaaccgttaaggtctggactatcagaggtcaatgt
ttggctaccatgttgggtcacaacgactgggtttctcaagtgagaatcgctccaactgaa
gatgctaacgatgacaccgtcaccgttatctctgctggtatggacaagatggttaaggct
tggaacgttaaccaattccaaattgaagctgacttcatcggtcacaacaactacgttaac
accatcactgcttctccagatggttctctagttgcttccgctggtaaggacggtgaaatc
atgttgtggaacttggctgacaaggtcccaatgtacactttgtctgctcaagacgaagtt
ttcgctttggccttctctccaaacagatactggttgtctgctgctacttcttccggtatc
aagatcttctgtctagatccaaaatacttggttgatgaattgaaaccagaattcgctggt
tacaccaaggcttccgaaccacacgccgtttccttggcttggtccgctgatggtcaaact
ctatttgctggttacaccgacaacgtcatcagagtttggcaagttatgaccgctcactaa

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