Zhouia spongiae: MQE36_02880
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Entry
MQE36_02880 CDS
T08031
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
zsp
Zhouia spongiae
Pathway
zsp02020
Two-component system
zsp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
zsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MQE36_02880 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MQE36_02880 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zsp03021
]
MQE36_02880 (rpoN)
Transcription machinery [BR:
zsp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MQE36_02880 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
HTH_IclR
MarR
Motif
Other DBs
NCBI-ProteinID:
UNY99297
LinkDB
All DBs
Position
662532..663995
Genome browser
AA seq
487 aa
AA seq
DB search
MLKQQLQFKLSQKLSPQQIQLMKLIQLPTQAFEQRLKQELEENPALESGREETSEYDDLD
NNYDDQYEDEFEQDTTNDEIDIDQYLSDDEIPEYRLQANNYSSDDEDKSVPYAAGTSFHQ
FLLNQLHTFWLEDQDMAIAEFLIGSIDDSGYIRRPVPDIVDDLAFTQGIFTEETEVDRIL
KIVQEIDPAGVGARDLQECLLIQLKRKDKNSKTDLAIDIIENSFEKFTKKHYKKLIQKYN
ISEEELKEAIHEIERLNPKPGGAYSGNNKIIEHIIPDFTIRIIDGELELTLNGRNAPQLH
VSREYDNMLKGYKETKDKSKSNKDAVQFIKQKLDAAKWFIDAIKQRQETLLITMNSIMHI
QEEYFLTGDERKLKPMILKDIADQIGMDVSTVSRVANSKYVDTPYGTILIKDLFSESVKN
EEGEDVSTRQIKKILETVIEEEDKRKPITDEGLAAILKEKGFPIARRTVAKYREQLNIPV
ARLRKEI
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaacagcaattacaatttaaattatctcaaaagttatcgcctcaacaaattcaa
ttaatgaagctgatacaattgcctacacaggcttttgagcagcggttaaaacaagaatta
gaagagaatcctgctcttgaaagcggcagggaagaaacatctgagtatgatgacctcgac
aacaactatgacgatcagtatgaagacgaattcgagcaggacactacgaatgatgagatt
gatatcgaccagtatctaagtgatgacgaaattcctgaataccgcctgcaagcaaacaat
tatagtagtgacgatgaagacaagagtgttccttatgctgccggcaccagtttccaccag
tttttattaaaccaattacacactttttggctggaagaccaggacatggcaattgctgaa
tttttaataggcagtatagacgacagcggatacataagaagacctgtacccgatattgta
gatgatcttgcatttacacaaggtatctttacagaagaaactgaagtggataggattctt
aaaatcgttcaggaaatagatccagcaggtgttggcgcccgtgatctgcaggaatgcctg
ctgatacagctaaaacgaaaggacaagaactctaaaaccgatttagctattgatattatt
gaaaattcttttgaaaagttcacgaaaaaacattacaaaaaactcatccagaaatacaac
atttcagaagaagaactcaaggaagccatacatgaaatcgagaggctaaaccctaaaccc
ggtggcgcatactcgggaaataataagataatcgaacatatcatacccgactttaccatc
aggatcatcgatggtgaactggaacttacattgaatggccgcaacgctccgcaattgcat
gtttccagggagtatgacaatatgctgaaagggtacaaggaaaccaaggacaaatcgaaa
tccaacaaagatgccgttcagttcatcaagcagaagttagatgcagccaaatggtttatt
gacgccattaaacagcgacaggagacccttttgatcaccatgaattccatcatgcatatt
caggaggaatattttctgaccggtgacgaacggaagttaaaacctatgatcttaaaagat
attgcagatcagataggcatggacgtttcgaccgtatccagggtcgccaacagtaaatac
gtcgataccccttacggcacgattttaatcaaggacctcttctctgaatctgtaaaaaac
gaagagggagaagatgtttctaccagacagataaagaaaatattagagacggttattgaa
gaagaagacaaacgtaagcccattacggatgagggcttagccgcaatattaaaagaaaag
gggttcccgattgccagaagaaccgttgccaagtatagagagcagttaaacatcccggta
gcccgcttaagaaaggaaatttaa
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