Zhouia spongiae: MQE36_06710
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Entry
MQE36_06710 CDS
T08031
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
zsp
Zhouia spongiae
Pathway
zsp03030
DNA replication
zsp03430
Mismatch repair
zsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MQE36_06710 (dnaE)
03430 Mismatch repair
MQE36_06710 (dnaE)
03440 Homologous recombination
MQE36_06710 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zsp03032
]
MQE36_06710 (dnaE)
03400 DNA repair and recombination proteins [BR:
zsp03400
]
MQE36_06710 (dnaE)
Enzymes [BR:
zsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MQE36_06710 (dnaE)
DNA replication proteins [BR:
zsp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MQE36_06710 (dnaE)
DNA repair and recombination proteins [BR:
zsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MQE36_06710 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
UNZ00034
LinkDB
All DBs
Position
1538642..1543027
Genome browser
AA seq
1461 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPISDTDNWPRAIQIAWQLHDEMGNVIEHQDYLIRPDGFNIPF
DAEKVHGISTELAQEQGISLEEVLEKFNIALRKTKFVVGQNVGFDVNIMGAEFYRLGVET
KMAELPVLDTCTEVTAELCKIPGGRGGKFKLPTLTELHEFLFGEPFAEAHNATADVEATT
RCFFELIRRGDGFTIEELDVPADYFNRFSEVNPQTIELIGLKHINLKAESDKIRQRLKKE
DPQEQLSKEEIQQNIAELAEVSFSHLHNHTQFSVLQATSKIPALVAAAAKHKMPAVALTD
IGNMMGAFHFVRDVGNHNKAAKAKNEEAIAKGEEPTEVIVKPIVGCVFNVCEDHTDKSRK
DNGYQVVMLAKNKNGYHNLAKMSSIGFTYGFYYVPRIDKKVIEQYKEDVMVLTGNLYGEV
PSKVLNVGENQAEEALLWWKDQFGDDLYMELMRHGQEEEDRVNDVLIQFSKKHDVKLVAT
NNTYYIDKDGANAHDILLCVKDGEKQTTPIGRGRGYRYGLPNQEYYFKGSDEMKGLFKDL
PEAIINTNEIVGKVEPFELARDVLLPKFEIPEEFQFEEDELDGGKRGENNFLRHLTYKGA
EDRYDEITDDIRERLDFELQVIEKTGYPGYFLIVQDFIAAAREMGVSVGPGRGSAAGSAV
AYCLGITNMDPISYDLLFERFLNPDRVSMPDIDIDFDDEGRSLVMDYVIDKYGANQVAQI
ITYGTMAAKSSIRDTARVLDLPLQEADRIAKLIPNTTLGKIFGLDEAKLKEKLRSEELLK
VNELKNIAEGKDLEAQTINQARILEGSLRNTGIHACGVIITPDDITKFVPVSVAKDSDLW
VTQFDNSVVENAGLLKMDFLGLKTLTLIKDTVKLVKYKHNIDLVPDDFPLDDQNTYELFQ
RGETVGVFQYESAGMQKYMKELKPTVFADLIAMNALYRPGPLEYIPSFIRRKHGDEEIVY
DLPAMEEYLKETYGITVYQEQVMLLSQSLAGFTKGEADMLRKAMGKKIFALLEQLKPKFL
DGGEAKGHPRDVLEKVWKDWEAFASYAFNKSHSTCYAWIGYQTAYLKANYPAEYMAAVLS
NNMNDIKQVTFFLEECKRMGITVLGPDVNESFYKFTVNDEGAIRFGMGAVKGVGKGAVQT
IVDNRKEGRYKSVFDMAKRIDLRAANKKAFENLAFAGGFDSFLDTHRAQYFHDGGDGITF
LEKTIKYGAKFQENENSSQVSLFGESSEVQIPEPEVPPCEEWGTMEKLKREREVVGIYIS
GHPLDDFKTELEVFCNADLSILSQLEKYVNREVSLGGVISTVDHRVSKNGKGWAIFIVED
YNESYEFKIFGEEYLKFRHFLIPNSFVYIKSYIKEGWVNKDTGKRSDPKIQFNNFMLLQD
VMSTYAKKLTIRVNVADLQEEQITSLKGLLSSHSGDHILNFIVYDMEEEIKLTMPSRKQK
VHITSELLGALKTQNVNYKLN
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatcttcgatacagaaaccacaggcttgccaaaacggtgggatgcgccgatc
tcagataccgacaactggccaagagcaatacagatcgcctggcagttgcacgatgagatg
ggaaatgtaatcgaacatcaggattatttgatccggccggacggattcaatatcccgttc
gatgccgaaaaagtgcatggtatttctacggaactggctcaggaacagggaatctctctt
gaggaagtgttggaaaaattcaatattgcattacgtaagacgaagtttgtagtaggtcag
aacgtaggcttcgatgtgaatattatgggagctgagttctaccgtttaggggtagaaacc
aagatggccgaattaccggtattggatacctgtaccgaagttactgcagaattgtgtaaa
atacccggtggacgaggcggtaaatttaaattgccgacgttaacagagctgcacgaattt
ttatttggcgaaccttttgccgaagctcacaacgcaactgccgatgtggaggctactact
cgttgtttcttcgagttgatcaggaggggagacggatttaccattgaggagctcgatgtt
cctgccgattattttaaccgtttttcagaagtcaatccacagaccattgagcttatcggg
ttaaagcatattaacctcaaggccgaatccgataaaatacgtcaacggttaaaaaaagaa
gatccccaggaacaattatccaaagaggagattcagcagaatattgccgagttagcagaa
gtttcattctcacatttacataaccatacccagttttcagtactccaggctacatcaaaa
attccggcacttgtagcagcagcagcaaagcataaaatgcctgccgtagcgcttacggat
attggtaacatgatgggagccttccatttcgttcgtgatgtgggaaatcataacaaagcc
gccaaagcaaaaaatgaagaggccatagccaagggagaagaaccgaccgaagtaatcgtg
aaacctatagtaggttgcgtctttaatgtctgtgaagatcacacagataaatccagaaaa
gataacgggtatcaggttgtcatgctggccaaaaataaaaatggttaccataacctggct
aaaatgtcatcaattgggtttacctatggattctattatgtgccccgtatcgataaaaag
gtaattgagcagtataaagaagatgtcatggtgcttaccggtaacctatatggagaagtg
ccgagtaaggtgttgaatgtcggggaaaatcaggcggaagaagcgttactctggtggaaa
gatcaatttggagatgacctgtatatggaactgatgcggcacggccaggaagaagaagac
cgtgtaaatgatgttttaattcagttctctaaaaagcatgatgtaaaactggtggcaacc
aataatacctattatatagataaagatggtgctaatgcacacgatatcttgttgtgtgtg
aaggatggcgaaaaacagaccacgccgattggcaggggtcgtggctatcgttatgggttg
ccaaatcaggaatattattttaagggctcagatgaaatgaaagggcttttcaaagatctt
cccgaggccatcattaatacaaatgaaatagtaggtaaggtagagccttttgaactggcc
cgggatgtattacttccgaagtttgagattcccgaagaatttcagtttgaagaagacgaa
ctggacggaggtaaaagaggagaaaataattttcttcgtcacctgacatacaaaggagca
gaagatcgctatgatgaaataaccgatgatattcgggagcgactagatttcgagttacag
gttattgaaaaaacagggtacccgggatatttccttattgtacaggatttcatcgctgcg
gctcgtgagatgggcgtgtcagtaggtccgggtcgtggatctgccgccggatcggcggtg
gcttactgtctcggtattaccaatatggatccgatttcatacgacctcctttttgagcgt
ttcctgaatccggatcgtgtgagtatgcccgatatcgatatcgacttcgacgatgaagga
cgtagtttggtaatggattatgtgatcgataaatacggggccaatcaggtggctcagatt
attacctatggtaccatggcggcaaaatcatccatccgcgatacagcaagagtactcgat
ctgccattacaggaagcagaccgcatagcgaagctgataccaaacacaaccctggggaaa
atattcggcctggatgaagccaaactgaaagaaaaactgcgttcagaagagcttcttaag
gtgaacgaactgaaaaatatagcagaagggaaagacctggaggctcagaccataaaccag
gcccgtatactggaaggttcgttgaggaatacaggtattcatgcctgtggagttatcatt
acccctgatgatattacaaaattcgtgcctgtatccgtagctaaagattccgatctgtgg
gtaacgcagtttgataactcggtcgtggaaaatgccggtctgctgaaaatggatttcctg
gggctgaaaaccttaaccctgattaaggataccgtaaagcttgtaaagtacaaacacaat
atagacctggtccctgacgattttcctctggacgatcagaatacatatgagctgtttcag
agaggagaaacagtaggggtgttccaatacgaatctgccggaatgcagaagtatatgaaa
gaactcaagcctaccgtttttgcagatttgattgccatgaacgccttgtaccgtcccggg
ccattggaatatattcctagttttatccgcagaaagcacggagacgaggagatcgtttac
gacctccctgctatggaagaatacctgaaggagacttatggtattacagtgtaccaggag
caggtgatgttattgtcccaaagcctcgcaggctttaccaagggtgaagccgatatgctg
cgtaaggcgatgggtaaaaagatatttgccttactggaacaacttaaaccgaagtttctc
gatggtggtgaagccaagggacatccgagagacgtgttggagaaagtatggaaagactgg
gaagcatttgccagttacgcttttaataaatcgcactctacctgttatgcatggatcgga
taccaaacggcatatctgaaggcaaattatccggcagagtatatggcggccgtgttgtcg
aacaacatgaatgatatcaaacaggttactttctttcttgaggaatgtaaacggatgggg
ataacggtactcggacccgatgtaaatgaatccttctataaatttactgtaaatgacgag
ggagctattcgtttcggaatgggagctgttaaaggagtgggtaaaggtgctgttcagact
attgtagataacagaaaagagggacgttataaatcggtgttcgatatggccaaacgtatc
gatttgcgggcagccaataaaaaagcatttgagaatctggcctttgccggaggtttcgat
tcctttttagatacacacagggctcagtatttccacgatggcggcgatggtattactttc
cttgaaaagaccattaaatacggagctaagtttcaggaaaatgaaaactcatcacaagta
agtctttttggagaaagtagtgaagtgcaaatccctgaacctgaagttcccccttgtgaa
gaatggggaaccatggagaagttaaaacgcgaaagggaagtggtcggaatatacatctcc
ggtcacccgttagacgatttcaaaactgaactggaggtgttttgtaatgccgatctgtcc
atcttgtcccaattggagaagtatgttaatcgtgaggtttccctgggaggagttatttct
acggtagatcaccgcgtgtcgaaaaacggaaaaggctgggctatttttatagtagaagac
tataatgaaagttatgagtttaaaatatttggagaagaatatctgaaattcaggcatttc
ctgatccctaattcatttgtttatataaaatcatatatcaaagaaggttgggtaaataaa
gatacaggaaaacgatccgatcctaagatacagtttaataacttcatgttgttacaggat
gtgatgagtacctatgctaaaaaattaacgatcagggtcaacgttgctgacctgcaagaa
gagcagataacgagcctgaaaggtttgctctcgtctcattctggcgatcatatcctgaat
tttattgtctacgatatggaagaagagataaaattgaccatgcctagcaggaagcaaaag
gtacatattacaagtgagttgcttggtgctttgaaaactcagaacgtaaattataaactg
aactaa
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