Zhouia spongiae: MQE36_07545
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Entry
MQE36_07545 CDS
T08031
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
zsp
Zhouia spongiae
Brite
KEGG Orthology (KO) [BR:
zsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zsp03032
]
MQE36_07545 (topA)
03400 DNA repair and recombination proteins [BR:
zsp03400
]
MQE36_07545 (topA)
Enzymes [BR:
zsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MQE36_07545 (topA)
DNA replication proteins [BR:
zsp03032
]
Prokaryotic type
DNA Topoisomerases
MQE36_07545 (topA)
DNA repair and recombination proteins [BR:
zsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MQE36_07545 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
UNZ00187
LinkDB
All DBs
Position
1732875..1735367
Genome browser
AA seq
830 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDFKVTSSFGHIADLPSRELGVDVEKDFKPKYVVDKEK
KALVKKLKEMAKSSDTVWLASDEDREGEAIAWHLAETLKLDKDKTKRIVFNSITKSAILK
AIENPRTIDYNLVNAQQARRVLDRLVGYEISPILWKKIKTGLSAGRVQSVAVRLIVERER
EIQGFVPEASYRVAAEFVTKEGKVFKAKLQNTFNSKEAAGKFLQKNIAADFSVSDLDTRP
AKKSPAAPFTTSTLQQEASRKLYFSVSKTMRMAQRLYEAGLITYMRTDSTNLSSEAVKAA
KEEIVRSYGEKYSKPRNYATKAKGAQEAHEAIRPTNMAVHDLKDVERDMARLYELIWKRT
IASQMSEAQLERTNVKIQANKHDELFLASGEVLKFDGFLKVYLEGTDDEDEEQEGMLPAL
TVGEYVDKKYMSATQRYTRPPYRYTEASLVKKLEELGIGRPSTYAPTISTIQTRGYVERG
MVEGVERKYVQLMLLQDSVKEEVYAEKVGSDKGKLVPTDIGMIVNDFLVNHFSSILDYNF
TAKVEEDFDNIASGGEDWTKMMKDFYEDFHPNVKNVEEHAERETGERVLGEDPESGRQVS
VRLGKFGPMAQIGTSEEEEKPRFASLLPDQSIETLTLEEALSLFELPRVLGVYEGEEVAV
NVGRFGPYVRFGKSFVSLGKDDEVFDVTMDRAIELIKEKQKADAPIASYQGKEVTKGKGR
FGPFIKWDGKFINVNKKYDFDNLSDEDIVALIEDKIKKDAEKLISYWEEEDIKLEKGRWG
TSTITKGKKKINLPKTVDATKLTLEQVKEIIEKETKTKKKTTKKTTKSKK
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatttagtgatagtggagtcgcctgcaaaggctaagacgattgagaaattt
ctggggaaagattttaaagtaacctctagttttgggcatattgctgatttgccttcgcgg
gagttgggagttgacgtagagaaagattttaaaccgaagtatgtagtcgataaagaaaag
aaagctttggttaaaaagttaaaagaaatggcgaagtcttctgatactgtctggctggca
agtgatgaagaccgggaaggggaggctattgcgtggcacctggccgaaactttaaaactg
gacaaggataagactaaaagaatcgtttttaactctattactaagagtgctattctgaag
gcgatcgaaaacccccggaccatagattataatttggtgaatgcccagcaggccaggcgt
gtattggaccgtttggtggggtatgaaatatcgccgattctttggaaaaaaataaaaaca
ggtttgtcggcaggacgtgttcagtcggtggctgtcaggttgattgttgagcgtgaacgc
gaaattcaaggttttgttcctgaggcttcttacagggttgctgcggagtttgtaacgaaa
gaagggaaggtttttaaggcgaaactccagaatactttcaatagcaaagaagcggccggg
aagtttttacaaaaaaatattgcagccgatttcagcgtgtcggatctggacaccaggcct
gcaaaaaaatcaccggcggcaccttttacaacttctacattgcagcaggaagcatcgaga
aaattatatttttctgtgagtaagaccatgcgaatggcccagcggttgtatgaagccgga
cttatcacatatatgagaacagatagtacgaacttgtcgtctgaagcggtaaaagcagct
aaggaagagattgtccgttcttatggggaaaaatacagcaaaccaagaaactatgccaca
aaggccaaaggagcccaggaggctcacgaggcaatccgccccacgaatatggctgtacat
gatttaaaggatgtagagcgcgatatggcccgtttgtatgagttgatatggaaacgaacc
atagcatcacaaatgagtgaagctcaattagaacgtaccaatgtaaagattcaggcgaat
aagcatgacgaactgtttctggctagtggagaagtgctgaagtttgacggtttcttaaag
gtgtatctggaagggacagacgacgaagatgaagagcaggaaggtatgttgccggcattg
actgttggggaatatgttgataaaaaatatatgtcggctacacagagatatactcgtccg
ccgtacagatatacggaggcttccctggtgaagaagttagaggagctggggatcgggcgt
ccgtcgacatatgcgcctactatttcaacgatacagacgagaggttatgttgaaagaggt
atggtcgaaggtgtcgaacgaaagtatgtgcagttgatgttacttcaggatagtgttaaa
gaagaagtatatgctgaaaaagtaggttctgataaggggaaactcgtgcctacagatata
ggaatgatagtgaacgactttttggtgaaccatttctcaagtattttggattataacttt
acagccaaggtagaagaggattttgataatattgcatcaggaggagaagattggactaag
atgatgaaagacttttatgaagattttcatccaaatgtgaagaacgttgaagaacatgcg
gaaagagagaccggagagcgtgtgttgggagaagacccagagagcggccgtcaggtaagt
gttcgtttagggaagttcgggccgatggcacagataggaacgtcggaagaagaagagaaa
cctcgctttgccagtttgttgccggaccagtctattgagaccctgacgctggaagaagcc
ttgtcgctttttgagcttccaagagttttaggagtgtatgaaggtgaagaggtggctgtc
aatgtggggaggtttggtccgtatgtgaggttcgggaagtcctttgtgtctctcgggaag
gacgatgaagtgtttgatgttaccatggacagggcaattgagctgataaaagaaaaacaa
aaggccgatgctcctattgccagctatcaaggtaaagaagtaaccaaagggaaaggcagg
tttggaccttttataaaatgggacgggaaatttatcaatgtaaataaaaaatacgatttc
gataatctgtcagatgaagatatcgttgcattgattgaagataagatcaaaaaagatgct
gaaaaactgatcagttattgggaggaagaagatattaaactggaaaaaggaagatggggt
acttctacaataaccaaagggaagaagaagatcaatcttcctaaaacggtcgatgcaacc
aagcttaccctggaacaggtgaaagagattattgaaaaggaaacaaaaacgaaaaagaaa
accactaaaaaaacaaccaaatctaaaaaataa
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