Zhouia spongiae: MQE36_11880
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Entry
MQE36_11880 CDS
T08031
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
zsp
Zhouia spongiae
Pathway
zsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MQE36_11880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zsp03019
]
MQE36_11880
03400 DNA repair and recombination proteins [BR:
zsp03400
]
MQE36_11880
Enzymes [BR:
zsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MQE36_11880
Messenger RNA biogenesis [BR:
zsp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MQE36_11880
DNA repair and recombination proteins [BR:
zsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MQE36_11880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
DUF2582
Motif
Other DBs
NCBI-ProteinID:
UNY97783
LinkDB
All DBs
Position
complement(2698435..2700336)
Genome browser
AA seq
633 aa
AA seq
DB search
MLDPLSVLKQYWGFDSFREPQEQVIDHLLNKQDTLALLPTGGGKSVCFQVPAMVLDGICI
VISPLVALIQDQVNQLKNKNIKAIGLTGGLKHNDIDTLLDNCIYGNYKFLYLSPERLQQE
LVQERIRQMPVNLIAIDEAHCISEWGHDFRPAYRNCSWLRETFPQVPIVALTASATADVQ
KDIINNLNLRQPQTVKSSFSRPNIAYMVFEEEDKKYKLERILKKNKGSSIIYVTSRKATV
SYTEFLTQLGIKAAFYHGGVSSDEKQEKLQAWLRDDIQVMVATNAFGMGIDKPNVRTVIH
LNLPDSIENYYQESGRAGRDGNKSFAVILKNKSDESQAEEQFIKVIPDTGFLKLLYKKLN
NFFQVSYGEGKDEVFAFNFNEFCHRYRFNGLLTYNGLKTLDRHSVINFTESYKNNIVLQF
TVNSNSLFSYMDKYPKIETIVQAILRTYGGVFDLPTKINTVLISSKTASTEEDVMNVLEQ
LAKDEIIALNAKNTDAEITFLVPREDDRVINIIAKDVKKQNKLKVNKLQAVFDYCNTNDR
CKSVQLLSYFGENDLRPCGICSFCILQKQKKTSHEVLDIVAEQILKLLKNSALSSRKIHE
QLTFREEFIIEAIRRLLEDDKICINQKNEYQLK
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatccattatcggttttaaaacaatactggggatttgactcattcagagagccc
caggaacaagtcatagaccatcttttaaacaaacaagacactctcgccctccttcctacc
ggtggcggaaagtctgtatgtttccaggttcctgcaatggtcttggatggtatatgtatt
gttatatcgcctcttgttgcactcatacaagatcaggtaaaccagttaaaaaataaaaat
ataaaagctattggactaacaggaggtttaaaacataatgatatagacaccttattggac
aactgcatttatggcaattataaatttttatacttgtctccagaacggctacagcaagag
ttggtgcaggagcggataagacaaatgcctgtaaacctgatcgctatagatgaggcacat
tgtatttctgaatggggacatgatttcaggcctgcatacaggaattgttcatggttaaga
gaaacctttcctcaagtacccatcgttgcactgacagcttctgccacagcagatgttcaa
aaagatatcataaacaaccttaatctgcgacaaccacaaacagttaaaagttctttttct
cgtccgaacattgcatatatggtatttgaagaagaagataaaaagtacaagctcgaacgg
atcttaaaaaaaaacaaaggttcttcaattatttatgtaaccagcagaaaggccactgtc
agttacaccgaatttttaacccaactgggaatcaaagctgctttttaccacggcggggtt
tcctctgatgaaaagcaggagaaactacaagcctggctccgtgacgacatacaggttatg
gttgctaccaatgcttttggcatgggtatcgacaaacctaatgtaaggaccgttattcat
ttaaacctaccagacagtatcgaaaattactatcaggagtcaggaagggccggcagggac
ggaaacaagtcgtttgccgttatccttaaaaacaaatcagatgagtcacaggcagaagaa
cagtttattaaagtaattccagacaccggtttccttaaacttctctataagaaactcaat
aatttttttcaggtgagttacggagaaggaaaagatgaggtttttgcatttaactttaac
gaattctgccatagataccggttcaatggcttgctaacctataacggtcttaaaacgtta
gacaggcattcggttattaattttacagaatcttataaaaacaacatcgttcttcaattt
accgtaaactccaacagcttgttctcctatatggacaagtaccctaagattgaaacaatt
gtccaggctattttaaggacatacggaggtgtctttgacctccccacaaaaatcaataca
gtactcatttcaagtaaaacagcttctactgaagaggacgtaatgaatgtgctggaacaa
ctcgcaaaggatgaaattattgccctgaatgctaaaaacacagatgccgagatcaccttt
ttagtccccagggaagacgacagggttataaacataatagctaaagacgtaaaaaagcaa
aataagcttaaagtcaataagcttcaagcagttttcgactattgcaacacgaacgatagg
tgtaaaagtgtacaactcctctcctacttcggagagaatgacttgcgtccatgcggaatc
tgttctttctgcattctccagaagcagaaaaaaacttcacatgaggtactcgatattgtc
gctgagcaaatattaaaacttttgaaaaacagcgcactctcttcaagaaaaatccatgaa
caattaacttttcgtgaagaatttattattgaagctatacgccggcttttagaggatgat
aaaatatgtatcaaccaaaaaaatgaatatcaactcaaatga
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