Zymoseptoria tritici: MYCGRDRAFT_100072
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Entry
MYCGRDRAFT_100072 CDS
T02285
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03030
DNA replication
ztr03410
Base excision repair
ztr03420
Nucleotide excision repair
ztr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYCGRDRAFT_100072
03410 Base excision repair
MYCGRDRAFT_100072
03420 Nucleotide excision repair
MYCGRDRAFT_100072
03430 Mismatch repair
MYCGRDRAFT_100072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ztr03032
]
MYCGRDRAFT_100072
03036 Chromosome and associated proteins [BR:
ztr03036
]
MYCGRDRAFT_100072
03400 DNA repair and recombination proteins [BR:
ztr03400
]
MYCGRDRAFT_100072
DNA replication proteins [BR:
ztr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
MYCGRDRAFT_100072
DNA Replication Termination Factors
ELG1-RFC complex
MYCGRDRAFT_100072
Chromosome and associated proteins [BR:
ztr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
MYCGRDRAFT_100072
DNA repair and recombination proteins [BR:
ztr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
MYCGRDRAFT_100072
Check point factors
HRAD17(Rad24)-RFC complex
MYCGRDRAFT_100072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
Rad17
AAA_11
AAA_22
RCF1-5-like_lid
RuvB_N
AAA_16
AAA_assoc_2
Mg_chelatase
SLFN-g3_helicase
AAA_28
DUF815
AAA_5
AAA_24
AAA_19
AAA_2
AAA_7
AAA_14
AAA_30
bpMoxR
RNA_helicase
ResIII
Parvo_NS1
AAA_6
nSTAND3
Motif
Other DBs
NCBI-GeneID:
13399724
NCBI-ProteinID:
XP_003853207
JGI:
Mycgr3_100072
UniProt:
F9X9A0
LinkDB
All DBs
Position
4:complement(2726551..2727866)
Genome browser
AA seq
408 aa
AA seq
DB search
MSFFDIRARKAAADAKAAQSSKAAPAETNRQQPWVEKYRPKSLDDVTAQDHTVTVLRRTL
QSANLPHMLFYGPPGTGKTSTVLALAKQLYGPELIKTRVLELNASDERGISIVREKVKNF
ARMQLSNPPSGPAGEEYRKKYSCPPYKIIILDEADSMTQDAQSALRRTMETYSKITRFCL
ICNYVTRIIDPLASRCSKFRFKSLDEGNAGKRIEDIARLEAVTLEDGVVETLLRCSEGDL
RKAITFLQSAARLVGAIQGPPTTTKRKRKTAVEDDEEDGDAMDIDTSSTTSPPITVAIIS
EIAGVIPDPTIDRLVASLTPKSSSQPAPYAPIAQAVEDLVAEGWSAGQIVSQLYDKIVIW
NETVGDRAKGKIMAVFSEADKRLVDGSDEHLTVLDLCLRVAGELGGDR
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttttcgacatacgagcacggaaagcggcggccgacgccaaagcagcacaatcc
tccaaagccgccccggccgagacgaatcgccagcagccatgggtggagaaataccgcccg
aagtccctcgacgatgtcaccgcccaagaccacactgtcaccgtcctccgccgtaccctc
cagtccgccaatctcccgcacatgctcttctacggcccacctggaacaggaaagacatcc
acagtcctcgcactcgccaaacagctctacggccccgaattgatcaagactcgcgtcctc
gagctcaacgcctccgacgagcgaggcatcagcattgtcagagaaaaggtcaagaacttt
gctcgcatgcagctcagcaacccgccaagtggaccagcaggagaggaatacaggaagaag
tactcgtgtccaccgtacaagatcatcatcttggacgaggcggacagcatgacacaggac
gcgcagagtgcgttgcggaggacgatggagacatattcaaagatcacacggttttgcttg
atctgcaactatgtcacaaggatcattgatccgctggcaagtcgatgcagcaaattcagg
ttcaagagtttggatgaaggaaatgcagggaagaggatcgaggatattgcaagactggag
gctgtcactctggaagacggcgtggtggagacacttcttcgctgcagcgagggcgacttg
cggaaagccatcacattcttgcaatcggctgcgagactagtcggtgcgatccagggccct
ccgacaactaccaagcggaagcgaaagaccgcagtcgaagacgacgaagaagatggcgac
gcaatggacatcgacacatcttccacaacctcacctcccatcaccgtcgcgatcatctcc
gaaatcgccggcgtcattcccgatccgaccatcgaccgactcgtcgcctccctcactccc
aaatcctcttcgcaacccgctccctacgctcccatcgcacaagccgtggaggaccttgta
gcagagggctggtcagcagggcagatcgtctcacagctgtacgataagatcgtcatctgg
aatgagaccgtgggtgaccgggcgaagggtaagatcatggcagtattctcggaagcggac
aagaggctggtggacgggagtgatgagcatttgacggtgctagacttgtgtttgagagtt
gccggggagttgggaggtgatcgatga
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