Zymoseptoria tritici: MYCGRDRAFT_100330
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Entry
MYCGRDRAFT_100330 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K14312
nuclear pore complex protein Nup155
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MYCGRDRAFT_100330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_100330
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
MYCGRDRAFT_100330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
CCDC113_CCDC96_CC
Motif
Other DBs
NCBI-GeneID:
13396803
NCBI-ProteinID:
XP_003852481
JGI:
Mycgr3_100330
UniProt:
F9XC47
LinkDB
All DBs
Position
5:complement(<2259637..>2263706)
Genome browser
AA seq
1301 aa
AA seq
DB search
MQQSVVEAQNTAAAAAHTTAPVERAARTINETLASEERFPELESYVLQGTSGGYELPTGP
AWLPFQKLKMHDLPPRLLEQANHAGMGMQMGIFPALAHAWVALDNCLYLWDYSITNPEII
GFEESTQPITAVKLVAPKPGVFIEDIKHMIVICTSDTMTLLGVATQSTSTGAPTIALYNT
KMSIPIRGINVSLIEYSRNTGRIFFCGSITDDIYEFHYQQDEGWFSGRCNRLCHTRTSSN
FVAEKITSFGDMFASSGPKNSWRQLVIDDTRNLMYTLSTTSEIKVWLIKDRIEGGLLRPM
QSLLQNTGHFNSRMELLVGREVSLASISVVTAVEASKIGLVATTSTGCRLYLSLTRGYGN
QADAQNPPSSMQVLHIRFPPSNPNAPPPQPQQGQTALTTYNQNPSSGQGDSQSRYLTPTT
MSYRFAPGYWMAFQPHPNDPSKDRVFCAAPDSARLKNPQDPHQLKDRYGEYGQWIDLPAN
VQQVMSMTDTFGATNAPAGFGNELAVQYDVKSSEFAIVTSAGIQTFRRRRLVDIFAAMLK
YGSSDDEGNEGDIKRFVRTYGRGETAATALAVACGQGMDVADSRIANVTDPDVIEKARRA
FIEHGGKADYSANDVVDQGQAPIDSVRPSPRHEGMALYISRLVRSIWRATIIKEVLVPGA
GAKLEPTIALTKLRSIQRDLTSLNEFLERNRSFIEGLAGPDALSRVNSRQEEIALQGEHR
AMNSLLQLISSISEGISFVLVLFDERIEEILALLPDQSKQDARQLTFERLFVSPIGRELA
KDLVKAIVNRNIANGSNVDSVAEALRRRCGSFCSADDVVIFKAQEQVKRGSEAGSTDAGR
QLLNESHRLFKKVAGSLSYEHLKWAVERYVEMSFYAGAISLCLDVAAEKDKSRRAHAWLR
DGKPEGDERKADFDAREQCYKLVFMTIVHLDASTANSPETVDGRHTLAGKRRSEAYDIVN
CSDDTVFLTCLYDWYVGELAQPDRLLEINNPFVVEYLRKRSQDSRGHADLLWRYFAHQND
YLQSASVQLDIARSHFDISLEERIGYLSRARTNASTRQTALTDARQSKQKLLREVSDLLD
IAQIQDEILSRIRADTRFTNETRPALVQELDSQILSVEILFNKYADGGGYHDLCILLYMV
ADHRNAADIKASWEQLITATDAEAPALHGRQRAPWEAVGEKVREMGRRLQTAPSTFPIPM
LLPLLEKYADSCGSINRPGDSWAVDVFLDLEIPHETILPILEMIYFGNEYPFEGQKRGLI
AGKMVYLIDSWLKASERNGDRIPFGTLLAMASSGCTLGQIQ
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagtctgtcgtcgaggctcagaacaccgctgccgccgccgcacatacgactgcg
ccggtagagcgggcagcgcgtacgatcaacgagacactcgcaagtgaagagcgctttcca
gagctggaatcatatgtgctacaaggcacaagtggaggatatgagctgccaacagggccg
gcgtggctgccattccagaagttgaagatgcacgacctcccgccgagacttctggagcag
gcgaaccacgcgggaatgggaatgcaaatgggcatatttccagcactggcacacgcgtgg
gttgcgctcgacaattgcttgtacctttgggactattctataaccaacccggagatcatt
ggctttgaggagagcacacagcccattactgctgtcaagctggttgcgcccaagccaggc
gtgttcattgaagacatcaaacacatgattgtcatctgcacgtccgataccatgactttg
ttgggcgtggcaactcagtcgacatcaacaggcgcgccgaccatcgctttgtacaacacg
aagatgtccattcctattcgaggaataaacgtcagcctcatcgaatactcacgcaatact
ggacgaattttcttttgcgggtcaatcaccgacgacatctacgaattccattaccagcaa
gacgagggctggttttcaggaagatgcaaccgcctctgtcataccagaacgtcttcaaat
tttgtcgcggaaaaaatcaccagtttcggggatatgttcgcctcatcaggaccaaagaat
tcttggaggcagcttgtcatcgatgacacccggaatttgatgtacacattgagcacaacg
agcgagatcaaggtgtggctcatcaaggatcgcatagaaggtggccttcttcgacccatg
cagtcactcctccagaacactggtcacttcaacagtcgtatggagctacttgtcggtcga
gaggtgtcgctcgcttcgatcagtgtagtcaccgctgttgaggcgtccaagattggattg
gtggctacgacaagtacaggctgcaggctgtatctttccctaacacgtggctatggaaat
caagcagacgcgcagaacccaccttcgagcatgcaagtcttgcacattcgctttccgccg
tcaaacccgaacgcacctccgccgcaaccacagcaagggcagaccgcacttacaacatac
aatcagaatccctcgagcgggcaaggcgacagccaatcgaggtacctgacgcccacaaca
atgtcctaccgctttgcacctggctattggatggcatttcagcctcatccgaatgacccg
tcaaaagacagagtcttctgtgctgcgcctgactccgcccgattgaagaatccgcaagat
cctcaccaactcaaggacagatatggagagtacggccagtggatcgatctgccagccaac
gtgcaacaggtcatgagcatgaccgacacgtttggagccaccaacgcgccggccggattc
ggcaacgagctggccgttcagtacgatgtcaaatcatctgaattcgctatcgtgacatcc
gctggcatacaaacattccgtcgaagaagactggtagacatattcgcggcgatgctgaag
tatggatcgtccgacgatgaagggaatgaaggcgacatcaagcgattcgtgcggacctac
gggcgaggagagaccgccgcaacagctctcgcagtggcatgtggtcagggtatggacgtc
gcggacagtagaattgccaacgtcacagaccctgatgtcattgagaaagcgaggagagca
ttcatcgagcatggaggcaaggccgactacagcgccaacgatgtcgttgaccaagggcaa
gctcctatcgatagcgtgcgtccgagtccgcggcacgaaggcatggcgctgtacatctct
cgtctggtccgctcgatctggagagcgacaatcatcaaggaagtgctcgtacctggagcc
ggcgctaagctcgagcctacaattgccctgacgaagcttcgttcgatccagcgagatctc
acatccttgaacgaatttctggaacgaaatcgcagcttcatcgaaggcttggctggtccc
gacgcgctgagccgcgtcaactcccggcaggaagagattgcacttcagggcgagcaccgt
gctatgaacagcctattacagctcatcagcagcattagcgagggcatcagctttgtcctt
gtgcttttcgacgagcgcatcgaggagatccttgctctgctgcccgatcaaagcaagcag
gacgcgagacagcttacattcgagcgtctcttcgtttcgcccataggccgcgagcttgcc
aaggatctggtcaaggccattgtcaatcgcaacattgcaaatggtagcaacgtcgacagc
gtcgccgaagctcttcgccgacgatgtggcagcttctgcagcgcagacgatgtggttatc
ttcaaagctcaagagcaagtcaagcgaggttcagaagcaggctcaactgatgctggacgc
cagcttttgaacgagagtcacagactgttcaagaaggtggcaggcagtctcagctacgag
cacctcaagtgggccgttgagcgttacgtcgagatgtcattctacgctggtgcaatctcg
ttgtgtttggacgtggctgctgagaaggacaagtcgcgaagagcgcatgcatggttgcga
gatggcaagccggaaggagacgagagaaaggcagacttcgacgcccgcgaacagtgctac
aagctcgtcttcatgacgatcgtgcatttggacgcatccactgcgaacagtcctgagacc
gtcgatggcaggcacactctcgccggtaagcgacgaagtgaagcttacgacatcgtcaac
tgctccgacgacaccgtcttcctcacctgcctctacgattggtacgtcggcgagcttgca
cagccagaccgcctgctcgagattaataatcctttcgtggtcgaatacctgcgcaagcgc
agtcaggacagcagaggccacgccgacctgctatggcgctactttgcccaccagaacgac
tacctccaatccgcctctgtgcagctcgacatcgccagatcgcacttcgacatcagcctg
gaggagcgcatcggctacctgtctcgtgcacgcacaaacgcaagcacccgccagacagca
ctcacagatgcccggcagtccaagcagaagctcctccgcgaagtatccgatctcctggat
attgcccaaattcaggatgagatcctcagccgcatccgcgccgatacacgcttcaccaac
gagacccgtccagcattggtccaggagctcgacagccagattctcagcgtcgagatcttg
ttcaacaaatatgctgatggaggtggctaccacgacttgtgcatcttgctgtacatggtc
gccgaccaccgcaatgctgccgacatcaaggcatcctgggaacagctcatcaccgccacc
gatgcagaggcgcctgcactccacggtcgtcaacgcgcgccttgggaagcagttggagaa
aaggtacgagagatgggtaggcgcctacaaaccgcaccatcaacctttccgatcccgatg
cttctccctctactcgaaaagtatgccgattcctgcggatcgatcaacagacctggcgac
tcctgggcagtcgacgtcttcctcgacctggagattcctcacgagacaatcctgcccatc
ctggagatgatctactttggcaacgaatatccatttgaaggccagaagcgcgggctgatt
gccggcaaaatggtgtacctgatcgactcatggctgaaggctagcgagcggaatggcgac
aggataccattcggtaccttgttagcgatggcgtcgagtgggtgcactcttgggcagatt
cagtag
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