Zymoseptoria tritici: MYCGRDRAFT_101457
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Entry
MYCGRDRAFT_101457 CDS
T02285
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCGRDRAFT_101457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ztr03041
]
MYCGRDRAFT_101457
03032 DNA replication proteins [BR:
ztr03032
]
MYCGRDRAFT_101457
Spliceosome [BR:
ztr03041
]
Complex A
U1 snRNP components
Sm proteins
MYCGRDRAFT_101457
U2 snRNP components
MYCGRDRAFT_101457
Complex B
U1 snRNP components
MYCGRDRAFT_101457
U4/U6.U5 tri-snRNP components
MYCGRDRAFT_101457
Complex C
U2 snRNP components
MYCGRDRAFT_101457
DNA replication proteins [BR:
ztr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
MYCGRDRAFT_101457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
13398152
NCBI-ProteinID:
XP_003849097
JGI:
Mycgr3_101457
UniProt:
F9XLF5
LinkDB
All DBs
Position
10:complement(970599..971150)
Genome browser
AA seq
122 aa
AA seq
DB search
MASAAAPDAKIQELLAKPRAELTEYEIGLLETHEFTSGPLSLLQTAVRNHAQVLISCRNN
RKMLARVKAFDRHCNMVLENVKEMWTEVPRLTDGKKGRPVNKDRFISKMFLRGDSVILVL
LS
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgcagctgcccccgatgcgaagattcaggagctcttagcgaagccgcgcgcc
gagctgaccgaatatgagatcggcctcctcgaaacccacgaattcacttctggtcctctg
tcgctcctccaaaccgccgtgcgcaaccatgcgcaagtcctgatttcgtgccgcaacaac
cgcaaaatgctcgcgcgcgtaaaagccttcgaccgacactgcaacatggttctggagaac
gtcaaggagatgtggacggaagttccaagattgacggatggcaagaagggccgcccagtg
aacaaggaccggttcatcagcaagatgttcttgaggggtgatagtgtgattttggtgctg
ttgagttga
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