Zymoseptoria tritici: MYCGRDRAFT_101861
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Entry
MYCGRDRAFT_101861 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
ztr
Zymoseptoria tritici
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ztr03009
]
MYCGRDRAFT_101861
Ribosome biogenesis [BR:
ztr03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
MYCGRDRAFT_101861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_HPS5
WDR54
Beta-prop_VPS8
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
KNTC1_N
PQQ_2
PEP5_VPS11_N
Beta-prop_SCAP
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
13401201
NCBI-ProteinID:
XP_003847783
JGI:
Mycgr3_101861
UniProt:
F9XPW9
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Position
13:complement(423744..425317)
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AA seq
489 aa
AA seq
DB search
MLAEHFIASTGVPAKAPGPNVAKDAAIFLHEFQPLAAQRSIFKKSATPPNCLAVSESHIF
AAQADKGVVHVYNRLKGNQEAIVPFTEKLASITLACDDSVLVLGTAEGRIFLWETCTGRQ
ITTSQAHLQAVTALAVDASSNFLLSASKDSTVHVWSLPALLSFSTTSAVSPLRTFSSHRS
EITSLTLGNGASNCNFVVSISKDKSCLVWDYHNNNLLRTYLLPGVPLCLALDPADRAAFV
GYEDGTLQQLDLHTSSNGALDAIQNGSNPTEPVQPPASTRWKLPESTHGAALSLSISFDG
STAISGHQSGTILAWDVPRGSFVSTQTQLPLPGPVSNVQFLPVTGFAARDQRTTKINEIV
KPKFGAFDSSDRDSVPGNYTLQVQFPTDIASTNATKQNNSFLDALTAPAFPLALLDEGLN
ELASWKKSPSTHANGAANLEALRRVQQKSLQKIVALSDENSILQKRGQQNSGASDATSEE
ESSSEDDSD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcggagcacttcatcgcctcgacaggcgtgcccgcaaaggcgcctggtccgaac
gtcgccaaagatgcggccatcttcctgcacgaatttcaaccgctggcagcccagcgatcc
atcttcaaaaagtccgcgacgccgcccaactgcttggcggtcagcgaaagccacatcttc
gctgcacaagccgacaaaggtgtcgtccacgtctacaatcgactgaaaggcaatcaggag
gccattgtaccattcactgaaaagctcgcatcgatcactctggcatgcgacgattcggtg
ttggtattgggcaccgctgaaggtaggatcttcctgtgggagacttgcacgggcagacag
atcacaacgagtcaagcccatctccaggctgtgaccgcgctggctgtggatgcgagctca
aattttctgctttcggcttccaaagactcgactgttcacgtttggtcactaccagctctg
ctatccttctctacgacatcagccgtctctccgctgcgcacattctcgtcacatcgatct
gagatcacgtctttgacgttgggcaatggcgcgtcaaattgcaactttgtcgtctcgata
tccaaagacaaaagctgcctggtgtgggactatcacaacaacaatctcctcagaacgtat
ctgctacctggagttccgctttgcctggctttggatccggctgatcgagcagcgtttgtt
ggatacgaagacggcactttgcaacagctcgaccttcacacctcctcgaacggcgcgctc
gatgccattcaaaacggctccaacccaacagagccagtgcaaccaccggcatccactcgg
tggaagcttcctgaatccacgcacggtgccgcattgagcttaagcatctctttcgacggc
agcacggccatctctggtcatcagtctgggacaattctcgcatgggacgtgcctcgtgga
agcttcgtctccacgcaaacacaactaccactgccagggcccgtcagcaatgtccaattt
ctaccagtgaccggatttgctgctcgagaccagagaacgacgaaaataaacgagattgta
aaaccaaaattcggcgcattcgacagctctgacagagacagtgtgcccggcaactacact
ctgcaagttcagttcccgaccgacattgcttctacaaacgctacgaagcagaacaacagc
tttttggacgctctgactgcgccagcttttccgctggcgttgctagacgaaggcctcaat
gagttggcatcgtggaagaagagtccaagcacacatgcgaatggcgcagcaaatcttgaa
gcattgagaagagtgcagcaaaagagtctgcagaagattgtggctctcagtgatgaaaat
agtatccttcaaaagcgaggtcagcagaatagcggcgcatccgatgctacaagtgaggaa
gaaagctcaagcgaggacgattcggactga
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