Zymoseptoria tritici: MYCGRDRAFT_104368
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Entry
MYCGRDRAFT_104368 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03013
Nucleocytoplasmic transport
ztr03015
mRNA surveillance pathway
ztr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCGRDRAFT_104368
09122 Translation
03013 Nucleocytoplasmic transport
MYCGRDRAFT_104368
03015 mRNA surveillance pathway
MYCGRDRAFT_104368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_104368
03041 Spliceosome [BR:
ztr03041
]
MYCGRDRAFT_104368
Enzymes [BR:
ztr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MYCGRDRAFT_104368
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MYCGRDRAFT_104368
Spliceosome [BR:
ztr03041
]
Complex C
Other components
EJC/TREX
MYCGRDRAFT_104368
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
MYCGRDRAFT_104368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
13393845
NCBI-ProteinID:
XP_003852069
JGI:
Mycgr3_104368
UniProt:
F9XAR5
LinkDB
All DBs
Position
5:444732..447017
Genome browser
AA seq
457 aa
AA seq
DB search
MSAGEEDLIDYSDEELQPNEATTGAVGANGEAKKGDLSANGGADKAKGSYVGIHSTSFRD
FLLKPELLKAITDCGFEHPSEVQQNCIPQAILGTDVLCQAKSGLGKTAVFVLSTLQQMEP
VNGEVSVLVLCHTRELAFQIKNEYIRFSKYMPEVKTEVFYGGTDIKENEKLLKNKETHPH
IIVATPGRLNALVREKKLRLGSVQRFVLDECDKMLDQIDMRRDVQEIFRATPPQKQVMMF
SATLSQAVRPICKKFMQTPLELFIDDEKKLSLHGLQQYYLNSKEDEKNRRLNDLLDELTY
NQVIIFVKTSNRAIELDRLLRECNFPSIAVYGHLNQEERIKRYQAFKNYDKRICVSTDVF
GRGIDIERINLAINYDMPDSPTNPGATDKETLNQAADTYLHRVGRAGRFGTKGVSISFVS
SERDMEVLKAIEARFEKKIDEYPEGGQGTILKEGEEA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccggagaagaggatctcatcgattactccgatgaggagctccagccgaacgag
gccacgaccggcgccgtaggcgcaaacggcgaagcaaagaagggcgacctcagtgccaac
ggcggcgccgacaaggccaaaggcagctacgtcggtattcactcaaccagtttccgcgac
ttcctcttgaagcccgagcttctcaaggccatcaccgactgcggtttcgagcatccatct
gaggtccaacaaaactgcatcccacaggccatcctgggtaccgatgttctctgccaggca
aagtccggtctcggaaagacagccgtcttcgttctgtccacccttcagcagatggagcca
gtcaacggcgaagtcagcgtcctggttctgtgccacacccgcgagttggccttccagatc
aagaacgagtacattcgcttcagcaagtacatgccggaggtgaagaccgaggtcttctac
ggtggtaccgatatcaaggagaatgagaagctgttgaagaacaaggagactcacccgcac
attatcgttgccacccccggtcgtctcaacgcgctcgtcagggagaagaagctgcgactc
ggcagcgtgcaacgcttcgtgttggatgagtgtgacaagatgctcgaccagattgacatg
cgccgcgatgtgcaggagatcttccgcgcgaccccaccccaaaagcaggtcatgatgttt
tcggccaccctgtcgcaggcggttcgacccatctgcaagaagttcatgcagactccgctc
gaactcttcatcgacgacgagaagaagctttctctgcacggtctccagcagtactacctc
aatagcaaggaggatgagaagaaccgccgcctgaatgatctgctcgatgagttgacctac
aatcaagtcatcatcttcgtcaagaccagcaaccgcgcgatcgagctggaccgcctcctc
cgcgaatgcaacttcccctcgatcgctgtctacggtcacctcaaccaggaggagcgcatc
aagcgctaccaggcgttcaagaactacgacaagcgtatttgtgtcagcaccgacgtcttc
ggccgtggtatcgatatcgagcgcatcaacttggccatcaactacgacatgcccgactct
ccaacgaaccctggcgctaccgacaaggagactctcaatcaggctgctgacacctacctt
catcgcgtcggtcgtgctggacgcttcggtaccaagggtgtgtccatcagcttcgtcagc
tcagagcgcgacatggaggtgctcaaggcgattgaggctcgtttcgagaagaagattgac
gagtaccccgagggtggccagggaaccattctcaaggagggagaggaggcttga
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