KEGG   Zymoseptoria tritici: MYCGRDRAFT_104520
Entry
MYCGRDRAFT_104520 CDS       T02285                                 
Name
(RefSeq) hypothetical protein
  KO
K11097  small nuclear ribonucleoprotein E
Organism
ztr  Zymoseptoria tritici
Pathway
ztr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ztr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MYCGRDRAFT_104520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ztr03019]
    MYCGRDRAFT_104520
   03041 Spliceosome [BR:ztr03041]
    MYCGRDRAFT_104520
   03032 DNA replication proteins [BR:ztr03032]
    MYCGRDRAFT_104520
Messenger RNA biogenesis [BR:ztr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     MYCGRDRAFT_104520
Spliceosome [BR:ztr03041]
 Complex A
  U1 snRNP components
   Sm proteins
    MYCGRDRAFT_104520
  U2 snRNP components
    MYCGRDRAFT_104520
 Complex B
  U1 snRNP components
    MYCGRDRAFT_104520
  U4/U6.U5 tri-snRNP components
    MYCGRDRAFT_104520
 Complex C
  U2 snRNP components
    MYCGRDRAFT_104520
DNA replication proteins [BR:ztr03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     MYCGRDRAFT_104520
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 13393978
NCBI-ProteinID: XP_003852202
JGI: Mycgr3_104520
UniProt: F9XCB8
LinkDB
Position
5:1330400..1331158
AA seq 99 aa
MGDRRGGGQRKVLLPPINFIFKLLQQHSTVQIWLYEQLGIRIEGKIRGFDEFMNLVIDEA
VEVKQPGKGQTEADVKDQRRELGQILLKGDNVCLIQSLT
NT seq 300 nt   +upstreamnt  +downstreamnt
atgggcgatcgacgcggcggcggccagcgcaaggtcctcctccctccaatcaacttcatc
ttcaagttgctgcaacaacacagcacggtgcagatctggttatacgagcagcttggaatc
cgtatcgagggcaagattcgcggatttgacgaattcatgaatttggtgatcgacgaggcg
gtggaggtaaagcagccaggcaaaggacaaaccgaggcagatgtgaaggatcagaggcgg
gagttgggccagattctgctcaaaggagacaatgtctgtctgattcaaagtttgacatga

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