Zymoseptoria tritici: MYCGRDRAFT_107385
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Entry
MYCGRDRAFT_107385 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K18748
protein SSD1
Organism
ztr
Zymoseptoria tritici
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_107385
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
MYCGRDRAFT_107385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Dis3l2_C_term
CSD2
Rrp44_CSD1
DUF4778
Motif
Other DBs
NCBI-GeneID:
13399153
NCBI-ProteinID:
XP_003856443
JGI:
Mycgr3_107385
UniProt:
F9X0B1
LinkDB
All DBs
Position
1:3693802..3699671
Genome browser
AA seq
1506 aa
AA seq
DB search
MHESTVDARPSRIRNLNDIRHLRTNSPERPTNRRRLRPSLHSPVTSIIFITALTHSFPQH
VAAADTPSFRNSSSSSVLRSLPTSLSLHTLHRNLHHRPALPGLHVASPRQLETAVYCIYS
PTTTLHKKFVMDQQGQQTGPQGPNGRRLHIAHRRSPSEMTPLMMEQLALAQQIEMLQQQQ
QQIAATHQQYVNMGMIPQQQQLPNQFQQLQGQMQNLNVGSNPAAFQFPQQPQMGQQHLGI
PMAGGMAQASAHRRNQSAMPNMGMGPPPAPSSGASGSAFGDFGNFGQNRTENNAPTRGRG
GGAAGGGHARRHSLALPEAKKAAELAEAKRKTSGFQFPIPGAAGAPPAPDNRAASPGSGE
AGSAAGSATRGGVGGRGHGRSQSMAVGNNRGMGQLSRGGPTGFQFPPQQATVDGGSNTSE
LSRRGSQGHGRTGSRNFDGNWRNPNPNNTQPPTDGQTTNMGNFHMNQHTSAQPFQPGHRQ
RGSVGGQSISSLQSFGNYQPQPQLMQLPQGQVLVQPAAMFGGQQLNALQLAQLQAYQQAG
IQAPTLAQLTGQHNGPQIGMHQQQQQRKTLFTPYLPQATLPALLGDGQLVAGILRVNKKN
RSDAYVTTTDLDADIFICGSKDRNRALEGDLVAVELLDVDEVWGQKREKEEKKKRKDVTD
QRSGNMTAVNDATTQPESASAAQEGGLRRRGSLKQRPTQKKNDDVEVEGQSLLLMEEDEI
NDEQKPLYAGHIVAVIERVAGQMFSGSLGLLRPSSQATKEKQEAERQARDGGNARHQERQ
QDRPKIVWFKPTDKRVPLIAIPTEQAPRDFVDRHQDYANKIFVACIKRWPITSLHPFGTL
VEQLGEAGDLKVETDALLRDNNFGPDDFSEAVIKNVGFEDWSIEKEGESALEGRRDFREE
QTFTIDPNGSKELDDAIHFKDLGDGNVEIGMHVTDIAHFVKANSLVDREAKKRGTGVYLT
DRTVNMLPSKITHDVCCLNPGEDRYTVSVVFKVDAASGRVSEEDTWVGKAIIKSSGKLSY
EEVDAVINGSKESSLGEERSKQILMLHNIAQKLRRGRYNSEEEDIPPLRLFYQLDDENVP
VERNIFDSSPAHEMIEELSHKTNAVVAQKIFAQLQDRALLRRQADPFPRRLQTFAERMAN
IGYDMDISSSASLQNSLFRIDDAEIRKGMETLIIKAMGRAKYVVPGKVPDPSLSHYALNL
PLYTHFTNPSRRYADIIVHRQLEAALSNGAVEFSEDLESLNKTAETCNTKKDSAHAAQEQ
SVHIESCRLMNRLSEEQGGDLISVGIVVCVYESAFDVLIPEYGFEKRVHCDQLPLKKAEF
DKNKRLLELYWEKGVPSSAFVPDDERPQAKGHRPTHSFVAREATAKHREAQEAERKAMNT
GSIDAQDVDALFDDDDDDNASEATDNAAGVALNGDRATQSGPPSPSRNGAPPQRSKSDSR
ALNNSAAPEAKLSNKDKYLGFFKLREENGHYIQDVKEMTRVPVLLRTDLTKSPPCLTIRS
LNPYAL
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaaagcactgtcgacgcgaggccaagcagaatacgaaacttgaacgacatcaga
catctcaggacgaattctccggagcggccgacgaaccgtcgtcgacttcgtccctctttg
cactctcccgtcacctccatcatcttcatcaccgcactcactcactccttcccacaacac
gtcgctgctgccgacactccttctttccgcaacagcagcagcagctccgtgcttcgatcc
ttacccacgagcttgtcgctgcatacactacatcgcaatctgcaccatcgacccgctctg
cctggcctccacgtcgcctcgcctcgacagctcgaaacagcagtctactgcatctacagc
cccacgaccactctgcacaaaaagttcgtcatggaccagcaaggccaacaaaccggccca
caaggcccgaacggccgccgactacacattgcccatcgtcgcagcccgtcagagatgacg
ccgctgatgatggaacaactggctttggcacagcagatcgaaatgctccaacagcaacag
cagcaaatcgctgccacacaccaacaatatgttaacatgggtatgatccctcaacagcaa
cagctccccaatcagttccaacaattgcaaggccagatgcagaatctcaacgtaggatcg
aatcctgcggccttccaattcccacaacaaccgcagatgggccaacagcaccttggcatc
cccatggctggtggtatggctcaagcatccgcgcatcgccgaaaccagtccgcaatgccc
aacatgggcatgggaccgcctcccgctccttcatccggcgcatccggctctgcctttgga
gactttggcaactttggccagaatcgcaccgagaacaacgccccgacacgtggaagaggc
ggtggcgctgcaggaggaggacatgcacgcagacactcgctggcattgccagaggcgaag
aaggcggccgagctggctgaggcgaagagaaagactagtggtttccaattcccgattcca
ggagcggccggagcgcctcccgccccagacaaccgtgctgcaagcccaggcagcggcgaa
gcaggctcagctgcgggcagtgcgactcgcggaggtgttggcggtcgtggacatggtcgt
agccagagcatggctgtcggcaacaatcgtggcatgggtcaactcagtcgcggtggtcca
acaggcttccaattccctccccagcaggccactgtcgatggaggctccaacacttcagaa
ctgagccgccgtggtagccaaggccatggccgtacgggctctcgcaactttgacggcaac
tggcgcaatccgaaccccaacaacacccagcctcctaccgatggacagactaccaacatg
ggcaacttccacatgaaccaacacacaagcgctcagccattccagccgggccaccgacag
cgtgggtcggttggcggtcagtcaatcagctcattgcagagcttcggaaactaccagccg
caaccgcaactgatgcagctccctcaaggccaggttctggttcagcccgctgccatgttc
ggtggccagcaattgaacgcgcttcagctcgcccagttgcaggcataccagcaagcaggg
attcaagcgcccactcttgcccaactcactggacagcacaacggtccacagattggcatg
catcagcaacagcagcagcgcaagacgctcttcactccctacctcccgcaggcaacgctc
cctgctttgctcggtgacggccaacttgtcgccggtattctccgcgtcaacaagaaaaac
agaagcgatgcttatgtcacgaccactgacctggacgccgacattttcatctgcggcagc
aaggatcgcaatcgtgctctggagggcgacttggtcgctgtcgagctgctcgatgttgac
gaagtctggggtcagaagcgcgagaaagaggagaagaagaagcgcaaggatgttactgac
cagcgtagtggcaacatgactgcagtcaacgatgctaccactcagccagaaagtgcctcg
gccgcccaggagggtggtcttcgtcgtcgtggtagcttgaagcagcgtccaacgcagaag
aagaatgacgatgtcgaggtcgaaggccaaagtctccttctcatggaagaggatgaaatc
aacgacgagcaaaagccactctacgccggccacatcgttgcggtcatcgaacgagttgct
ggtcaaatgttctctggttctctcggtctcctccgtccaagcagccaggctaccaaggag
aagcaagaagccgagcgccaggctcgcgatggcggcaacgcgcgtcaccaggagcgccaa
caagatcgtccgaagattgtgtggttcaagccaaccgacaagcgagtgccgctgatcgcc
attccgaccgagcaagctccacgagactttgtcgatcgtcaccaggattacgccaacaag
atcttcgttgcatgcatcaagcgctggcccatcaccagtctgcatccatttggaacactt
gtcgagcaactcggcgaggccggcgatctcaaggtcgagacagatgctctgcttcgggac
aacaatttcgggccggacgacttctccgaggcggtcatcaagaacgttggcttcgaagac
tggtccattgaaaaggagggtgaatcggctctggaaggtcgccgcgacttccgcgaagag
cagacgttcaccattgatcccaatggaagcaaggagctggacgacgccattcatttcaag
gatttgggagatggtaacgtcgagatcggcatgcacgtcactgacattgcccatttcgtc
aaagccaactctctggtcgaccgcgaagccaagaaacgtggcactggggtctacttgaca
gatagaactgtcaacatgctcccctccaagatcactcacgacgtttgctgcctcaatcct
ggcgaggaccgctacacggtctcggtcgtcttcaaggttgacgctgcatccggacgggtc
tctgaagaagatacctgggtcggcaaggccattatcaagagctccggcaagctgtcgtac
gaggaggtcgatgctgttatcaacggttcgaaggagtcttcgctcggcgaagaacgctcc
aagcagattctcatgctgcacaacatcgcacagaagctccgtcgtggtcgatacaacagt
gaagaagaagacattcctccactccgtcttttctaccagcttgacgacgagaacgtgccc
gtcgagcgcaacatcttcgactccagtccagcgcatgagatgatcgaagagctgagccac
aagacgaatgccgtggtggcgcagaagatcttcgcgcagttgcaagaccgtgcgctactc
cgccgacaagcggatcctttcccaagacgactgcagactttcgccgaacgcatggccaac
attggctatgacatggacatttcgagttctgcttccctgcagaacagcctcttccgtatc
gacgacgccgagattcgcaagggtatggaaaccttgatcatcaaggccatgggccgcgcc
aagtacgtcgtacctggaaaggtgccagatccgagcttgagccattatgcgttgaatctg
ccactttacacgcacttcaccaacccatcgcgacgctacgccgacatcatcgttcatcga
cagcttgaggctgctctctccaatggtgctgtggagttctccgaggatctcgagtcactc
aacaagactgcggaaacgtgcaacaccaagaaggattcagcccacgccgcccaggagcag
agtgttcacattgagtcctgccgtctgatgaaccgcttgagcgaggagcaaggtggcgat
ctgatctcggttggaatcgtcgtctgcgtctacgaatccgcgttcgatgtgttgattcca
gaatatggctttgaaaagcgtgttcactgcgatcagctaccattgaagaaggccgagttc
gacaagaataagcgactgctggagctctactgggagaagggagtcccatcatcggccttt
gttcccgacgatgaacgcccccaggccaagggtcaccgcccaacgcacagcttcgtcgca
cgagaggccactgctaagcacagggaagctcaagaggcggagcgcaaggcgatgaacact
ggctccatcgatgctcaggatgttgatgcgcttttcgacgacgacgatgacgacaacgcg
tccgaggccaccgacaatgccgctggagtcgctctgaatggcgatcgcgccacccagagc
ggtccaccgtcgccatcccgcaacggagctccaccgcagcgatccaagtccgactctcgc
gccctcaacaacagcgccgcgccagaagcgaagttgagcaacaaggataagtaccttgga
tttttcaagctacgcgaggagaacggccattacatccaagacgtcaaggagatgaccaga
gtgccagttctgctgagaaccgatctgaccaagagtccaccatgcttgaccatcagatcg
ctgaacccttacgctttgtga
DBGET
integrated database retrieval system
