Zymoseptoria tritici: MYCGRDRAFT_10934
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Entry
MYCGRDRAFT_10934 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K06100
symplekin
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MYCGRDRAFT_10934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ztr03021
]
MYCGRDRAFT_10934
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_10934
Transcription machinery [BR:
ztr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
MYCGRDRAFT_10934
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
MYCGRDRAFT_10934
U7-dependent histone pre-mRNA processing factors
MYCGRDRAFT_10934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
13398553
NCBI-ProteinID:
XP_003856760
JGI:
Mycgr3_10934
UniProt:
F9X0U2
LinkDB
All DBs
Position
1:5502518..5504704
Genome browser
AA seq
729 aa
AA seq
DB search
ETLKSLNSARDIVLRDPTLYPAVVPGIVQVVTPAAQLELRRWGADFLAETFASQVVTRES
KQQMSSEVLDTIKGYLNRKDIAGEEEDTNVVKSAVQCAASIYEFVFRHTVTAPTDTETWA
KIASIKSSILRRMDTAAPGVRICCIKFVACVVQTQTPGLVADPRRPEYEISLALVPRDHP
VIPPANLEAEASGLLDRLLSVLQDNVDDPLLVTATLNALANLVHKRASVASKVLTTVLNF
NPLKSATRPLSSRNRVTIRSMTRTTMSFLLNCLKRNPNSTFAGRIQQQIERLKHNLTEVF
SENNQLKRPAPDAPANGLDDAKRQRLNHAAANGAPVQQQRPHPPRPTAYPPLPPGPVSLA
QIWTLTDDVRINTFPVERVPRNIMETLVPALFQALTEDRLNEAINVVRSRWLELSKKTAV
DAAKAVTGDDDDDDYDPLATFEDTDQILNRLDDAPPNGVAPEIAVTTFNLPPPPPLTDQD
RDEYSKTALTRVFGTLASLDKEAKPKARQAHEHGFNRLAAVSASHDREGWITLVTRLATR
SSFDLGEKDEVKKENQDRSLSKRGHVFNLSAGIRESLLNYVMESFRSRMEVAIIWLNEEW
YSDRLQQKQNEAQGMDVDSDDLPNYWFWTLRLLDGMMPYFDVKDGRILIRLLSEVPAINR
DVLDRVRKIAEDPERVAISTNALLYLIMFKPPVRELAIDCVEQMWRENSDAKTSTKKILV
KWRPAVLEE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gagactctgaaatcgctcaattctgcacgcgacatcgtgctgcgcgatcccactctatac
cctgccgtagtgcctggtatcgttcaagtcgttacgcctgcagcacagctcgagctgcga
agatggggcgccgatttcctcgcagaaacgttcgcttcgcaggtcgtgacccgagaatcg
aagcagcagatgtcttcggaggtgctcgatactatcaaaggctatttgaaccggaaggat
atcgcgggggaggaggaggacacgaacgtcgtgaagagcgcggtacaatgtgctgcgagc
atatatgagttcgtgttcaggcacacggtgaccgcgccgacagatacggagacatgggcc
aagatcgccagcatcaagagcagcattttacggaggatggacacagcagcgcccggagta
cggatatgttgcatcaaatttgtcgcatgcgtggtacagactcagacgccaggcttggtc
gcagatcctcggcggcctgagtatgagatcagtctggcgcttgtaccaagagaccaccct
gtcataccgcctgccaacctcgaggctgaggcttctggacttctggacaggctgttgagt
gtgctgcaggacaatgtcgatgaccctctcctcgtgactgccaccttgaacgccctcgca
aaccttgtgcataagcgcgcgagtgtcgcgagtaaggtcttgaccacagtcctcaacttc
aacccgctcaagtcagcgacccgacctctatcatccagaaatcgagtcaccatcagaagc
atgacacgaacaacgatgtccttccttctgaattgtcttaaacgcaacccaaacagcacc
ttcgctggcaggatacagcagcaaatcgagcggttgaaacacaacttgacggaagtgttc
tcggagaacaatcaactaaagcgacctgcccctgatgcgccagccaacggattagacgac
gcgaagcggcagcgactcaaccatgcagcagcaaatggagctcctgtgcagcaacaacga
cctcacccgccgcgtccaaccgcatatccccccttaccacctggcccggtatctcttgcc
caaatatggacgcttacagacgatgtccggataaacacattccctgtcgagcgtgtgccc
cgaaatatcatggagacgctagtccctgctctcttccaagccctgaccgaggaccgactg
aacgaagccatcaatgtggtgagatcaaggtggctcgagctgagcaagaaaacagcggtg
gatgccgccaaagctgtcactggtgacgacgatgatgacgattacgatcccctcgcgaca
ttcgaggacaccgaccaaatcctgaacagactagatgatgcacctcccaatggtgtagct
cccgagattgctgtcactaccttcaacttacctccgcctccgcccctgaccgaccaagat
cgagacgaatacagcaagacggctttgacgcgcgtctttggaacccttgcgagtctcgac
aaagaagccaaaccaaaggctcgacaagcccacgagcatggcttcaatagactcgcagcc
gtttcagcgagtcacgatagagaaggctggatcacgctcgtcactcgactagcaacacgg
tcttcgttcgacctaggagagaaggacgaagtgaagaaagagaaccaggaccgttcgctc
agcaaaaggggccatgtattcaacctctccgctggcatacgcgagtcacttttgaactat
gtcatggagagcttccggagcaggatggaggtggctatcatctggctgaatgaggagtgg
tattcagatcgattgcagcagaagcagaacgaagcacaaggcatggatgtcgacagcgac
gacctgccgaattactggttctggacattgcgactactggatggtatgatgccatacttc
gacgtcaaagatggtcgcatcctcatcagattgctgtccgaagtaccggccatcaaccgc
gatgtgcttgatagagtgaggaagattgccgaggatccggagcgtgtggccatcagcacg
aatgcgctactgtatctgatcatgtttaagcctccggtgcgggagcttgcgatcgattgt
gtggagcagatgtggagggagaacagtgatgcgaagacttcgacgaagaagattctggtg
aaatggcggccggcagtgctcgaggag
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