Zymoseptoria tritici: MYCGRDRAFT_110344
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Entry
MYCGRDRAFT_110344 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03013
Nucleocytoplasmic transport
ztr03015
mRNA surveillance pathway
ztr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCGRDRAFT_110344
09122 Translation
03013 Nucleocytoplasmic transport
MYCGRDRAFT_110344
03015 mRNA surveillance pathway
MYCGRDRAFT_110344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_110344
03041 Spliceosome [BR:
ztr03041
]
MYCGRDRAFT_110344
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
MYCGRDRAFT_110344
Spliceosome [BR:
ztr03041
]
Common components
Common spliceosomal components
Cap binding complex
MYCGRDRAFT_110344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
Motif
Other DBs
NCBI-GeneID:
13402709
NCBI-ProteinID:
XP_003850501
JGI:
Mycgr3_110344
UniProt:
F9XIC9
LinkDB
All DBs
Position
8:complement(394829..397577)
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AA seq
844 aa
AA seq
DB search
MCADDDDFDQSFRNQRPRQEPPPGTRIRRGLLELAEDAGRLPHEVAANLAKLTAETYEDE
YVRDTFCTVALKLVVEQPFKIPFVAAVVLYGNAEKSEMARDVIKRAGEQLQDALEAGHWR
EFKLLLRFLACMAPLFEEDGVLPILDELFNRAVDLQTASSEDAVGIELVKIILLTIPYLV
ASSTDASLQQKVSELLEKTEIVASTPHALEVLVDPYPAQEGREEEKAMICASVISLIQAQ
LADEATSGWKLICIPRPYDPSFKPSAKVEGNGEEAPAESNGDNETKVAAKHAFPAINVPS
PVNQGSKALLPEVYFSLFADQDIESVPPTTNIASSLLRDTITDTINILDYNRNAVAKFLN
EIDCFWAQDTFVKRSTTFDKLRDLGPGKPTWKPEDVIIDAVFSQIFQLPSPEHRLVYYHS
LITESCKISPGAIAPSLGRAIRFLFRNIDQMDMELSYRFMDWFAHHLSNFEFRWKWTEWV
PEVELSNLSPKKAFINGVLDKEIRLSFAKRIRETLPEPYHKLIPASKEKDIPDFKFNNDQ
TPYAKEGREVLALLKKKAAEEEIQKVLDSVHAQASERGVEDPLVPSTDIYMTSILSIGSK
SLSHVLSTIDRCKERLLEIGGRSEAARRQIVASVLDFWCDHPGTAVNIVDKLLNYTIITP
MAVVQLAVQDRIDRGRALASSQVYEMVSITMFKVTNRVRQVLRERNNIKLPFEQRQQIDE
ALPRERQGMRDLFAAIEDAVSSVAAGANDEMIERYDGDSEEQQLIQLWGSRWARVWRRKA
AVEEALVGDAAVPELVQPPVVDVVEEQQRDDDMDQYELTKTGIERVSLPFEAQRKITHPY
EAMS
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcagacgacgatgacttcgatcaaagcttccgcaaccagcgcccccgacaagag
cctccgccaggcaccagaatccgccgaggacttctcgagctcgctgaagacgccggccga
ctgccccacgaagtcgcagccaaccttgccaaactgacggccgagacctacgaggatgaa
tatgttagggacacattctgcaccgtggctctcaagctggtagtggagcaaccgttcaag
atcccgttcgttgcggcggtcgtgctctacggcaatgctgagaagtcggagatggcgcga
gatgtgattaagcgcgcaggagagcaacttcaagatgcgctcgaggcgggacactggaga
gaattcaagctcttgttgaggttccttgcgtgcatggcgccgctcttcgaggaagatggc
gtcttgccaattctcgatgagctgttcaacagggctgtggatctgcagactgcgtcctct
gaagatgctgtcggtattgaattggtcaagatcattctgcttaccatcccataccttgtg
gcctcctcgaccgatgcatccttacagcagaaggtgtccgagctgttggagaagaccgag
attgtagcgtccacgcctcacgctctggaagttctcgtcgatccatatccagcccaggag
ggtcgtgaggaggagaaggctatgatttgcgccagtgtcatttcacttatccaagctcaa
cttgcggacgaggcgacctccggatggaagcttatttgtatcccgcggccttacgaccca
tccttcaagccatccgcgaaggttgaaggtaacggcgaagaagcgcccgccgagtccaat
ggcgacaatgagaccaaggttgcggcgaagcatgccttcccggcgatcaacgtaccatcg
cccgtcaatcagggcagcaaggcgttgctaccggaggtctacttctcgctgttcgcagac
caggacatcgagtcagtgccgccaaccacgaacattgcatcctctcttctgcgcgatacc
atcacggacacgattaacattctggactacaaccgcaatgctgtcgcaaagttcctcaat
gaaatcgactgtttctgggcgcaggacacattcgtcaagagatctacgacattcgacaag
ctgcgcgatctgggcccggggaagccaacatggaagccagaggatgtcatcatcgatgct
gttttctcgcagatcttccagctcccgtctccagagcacagactggtctactatcactcg
cttatcacagagtcgtgcaagatctcgcctggtgccattgctcccagcttaggacgcgca
attcgtttcctgttccgtaacatcgatcagatggacatggagctgtcatatcgcttcatg
gactggttcgctcatcacttgagtaactttgagttccgttggaagtggacagaatgggtc
cctgaagtcgaattgtccaacctctccccaaagaaggcattcatcaatggtgtactcgac
aaggagatccgtctgtcctttgccaagcgcattcgcgagaccctgccagagccctaccac
aagctcatcccagccagcaaagagaaggacattcccgacttcaagttcaacaacgaccag
acgccatacgccaaggaaggccgcgaggtcctcgctctccttaaaaagaaagccgcggag
gaggagatccaaaaagtcctcgactccgtccacgctcaagcctcggaacgcggcgtggaa
gaccctctcgtccccagcacggacatctacatgacctcgatcctcagcatcggctccaag
tccctctcccatgtcctctccaccatcgaccgctgcaaggaacgactcctcgagatcggc
ggccgatccgaagccgcccgtcgtcaaatcgtcgcttccgtgctggacttctggtgtgac
caccccggcacggccgtcaacatcgtcgacaagcttctcaactacaccatcatcacgccc
atggccgtcgttcagctcgccgtgcaagaccgcatcgatcgcggccgcgcgctggcttcg
tcgcaggtgtacgagatggtgtccattaccatgttcaaagtcaccaatcgcgtgcgacaa
gtcctccgcgagcggaataatatcaagttgccgtttgaacagcgtcagcagattgacgag
gcgttgccgagagagaggcagggtatgcgggacttgtttgctgcgatcgaggatgctgtg
tcgtccgtcgcggcgggtgcaaacgacgagatgattgagcggtatgatggagatagcgag
gagcagcagctgattcagctgtggggttcgcgctgggcgagagtgtggaggcggaaggcg
gcggttgaagaggcgcttgtgggtgatgcggcggtgccggaattggtgcagccgcctgtt
gtggatgtggtggaggagcagcagagggacgatgatatggatcagtacgaactcaccaaa
accggaatcgagcgggtatctcttcccttcgaagctcagcgcaagatcacccacccgtac
gaggccatgtcctga
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