Zymoseptoria tritici: MYCGRDRAFT_110783
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Entry
MYCGRDRAFT_110783 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCGRDRAFT_110783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_110783
03041 Spliceosome [BR:
ztr03041
]
MYCGRDRAFT_110783
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
MYCGRDRAFT_110783
Spliceosome [BR:
ztr03041
]
Complex B
Other components
Prp19-related factors
MYCGRDRAFT_110783
Complex C
MYCGRDRAFT_110783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
HAT_PRP39_C
Suf
TPR_8
TPR_2
TPR_10
RPN7
Motif
Other DBs
NCBI-GeneID:
13402225
NCBI-ProteinID:
XP_003849675
JGI:
Mycgr3_110783
UniProt:
F9XIX2
LinkDB
All DBs
Position
9:complement(1230334..1232904)
Genome browser
AA seq
841 aa
AA seq
DB search
MSLATPNSSQLWLCGASDEIYENDILRAPDNIKAWLDYAYFKRQYGTLLEQSFVLERACN
ALPRSYKLWKMYLELRVKHLQGRSPAKRKAEFQKVNALFERALVLLNKMPKIWEMYLTFL
CQQPLVTFTRRTCDRALRALPVTQHNRIWMLYRPFAYSAGGETAVKVWRRYIQLHPEHVE
EFIDLLAKEGKYTEAVQQYIRILNNPNFQSRQAKGPFQHWTEMLEILIDNARLVPNPVPL
PDGSTIDVELIIRSGCDRFPDQRGILWVGLARYYINLGSYERARDIFEEGITTVMTVRDF
SVVFDTYAEAEEALISIKLEDSAARQAKGRVDEDADLDLDIRMLRFEQLMDRRPFLVNDV
LLRQNPHNVNEWQKRVLLWGDNKPMIVQTYANAIAAISPKKAVGRFHELWTNYAKFYEEG
GDLANARIIMEKAVKVPYKSVAELAEMWTEWAEMELRNENFDQAVNIMASATKAPKRSNV
DYFDENLSPQQRVHKSWKLWSFYVDLVESVSSLEETKKIYDRIFELRIATPQTVVNYANL
LEENNYHEESFKVYERGLDLFSYPVAFELWNLYLTKAVDRRISIERLRDLFEQAVEGCPD
RFAKTLYLMYGALEEERGLARHAMRIYERATRAVADEDRAEMFEFYITKSASNFGLTSTR
SIYERAIAALPDKEAGIMCVKFAEMERRLGEIDRARAIYGHASQFCDPRVNAEFWRKWEG
FEVQHGNEDTFKEMLRIKRSVQAQFNTDVNFIASQAVARQQEIAQANGEDGEGDADEAEL
GAQKADAMAALERQARAPVGFVAATSGPEGGNRPPKVEGGGESAGGLKVSNADEIDIDDD
L
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcgccacgccaaactcgtcgcagctctggctttgcggagcctccgacgaaatc
tacgagaacgacattcttcgcgcgccggacaacatcaaagcgtggctggactatgcctac
ttcaaacggcaatatggcacacttctggaacagagcttcgtgctggagcgagcttgcaat
gcattgccgagaagctacaagctgtggaagatgtacctcgagttgcgcgtgaagcatcta
caaggccgaagcccggcgaagcggaaggcggagtttcaaaaggtcaacgctctgttcgag
cgggcgctggtactcctgaacaagatgccaaagatctgggagatgtacctcacattcctg
tgccagcagccgctggtcacattcacacggaggacgtgcgatcgcgcgctgagagctttg
cctgtgacccagcacaatcgcatatggatgctttaccgaccgttcgcatactcggcaggt
ggagagacggcggtcaaagtgtggaggagatatatccagctgcacccagagcatgtggag
gagttcattgatctgctggcaaaagaggggaaatataccgaagctgtgcagcagtatatc
cggatactgaacaacccgaactttcaaagcaggcaggcaaaaggaccatttcagcactgg
acggagatgctggaaatcttgatagacaacgcgcgattggtaccgaatcctgtacctttg
ccggacggcagcacgatcgacgtggagttgatcattcgctctggctgtgacagatttccg
gaccagcgtggtatactgtgggttggcctggcccggtactacatcaatttgggatcatac
gagcgagccagggacatcttcgaagagggcatcacaaccgtcatgactgttcgcgacttc
agtgtcgtcttcgatacatatgcagaagcagaggaggctctcatatcgatcaagctggag
gactctgcagcgcggcaggcgaaaggcagggttgatgaggacgcagatctggatcttgac
attcgaatgctgcgattcgagcaactgatggaccgacgaccattcctggtgaatgatgtg
cttctacgacagaaccctcacaacgtcaacgaatggcagaaacgggtcttgctatggggc
gacaacaagcccatgatcgtccaaacatacgcgaatgcgattgcagcaatcagtccgaag
aaggctgtcggccgctttcacgaactctggaccaactatgcgaaattctacgaagaaggc
ggcgatctggccaatgctcggataatcatggagaaagctgtcaaggtgccgtacaagtcg
gtggctgagctggctgagatgtggacagaatgggcagagatggagctgcggaatgagaac
ttcgaccaagccgtcaatatcatggccagtgcaacgaaggctccaaaacggagcaacgtc
gactacttcgatgagaacctctcgccgcaacaaagggtgcacaagagctggaagctgtgg
tcattctacgttgacctcgtcgagtcagtgtcatcactggaagagaccaagaagatctac
gaccgtatcttcgaactccgtattgccaccccccaaactgtcgtcaactacgcaaatctg
ctcgaagagaacaactatcatgaagaaagcttcaaggtctacgaacgtggcctcgacctc
ttctcctaccctgtcgcgttcgagctgtggaacctgtacctcaccaaagctgtcgatagg
cgcatctccatcgaacgcctccgcgacctcttcgagcaagctgtggaaggctgtccagac
cggttcgcgaagactctctacctcatgtacggcgctctggaagaggaaagaggactcgca
cgccacgccatgcgcatctacgaacgtgctactcgtgctgtggccgacgaagatcgagct
gagatgttcgagttctacatcacgaagtcggcgtccaatttcggtcttaccagcacccgg
tctatctatgaacgtgccatcgccgccctgccagacaaggaagccggcatcatgtgtgtc
aagttcgcggagatggaacgccgtcttggcgagatcgatcgtgcaagagccatctatggc
catgcatcccaattttgcgatcccagagtcaacgcggagttctggaggaagtgggagggt
ttcgaagtgcagcatggcaacgaagatacgttcaaagagatgttgcgcatcaagagatct
gtgcaggctcagttcaacacggacgtcaacttcattgcgagccaggccgtggcgagacag
caggagatagcgcaagcgaatggagaggacggcgagggcgatgcggacgaagcagagctt
ggcgcgcagaaggcggacgctatggctgcgctcgagaggcaggctagggcgccagttgga
ttcgtcgcggcgactagcggaccagaaggcggaaatcgaccaccgaaggttgagggcggt
ggagagtctgctggagggctgaaggtcagcaacgcggatgagattgacattgacgacgat
ctttga
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