Zymoseptoria tritici: MYCGRDRAFT_110826
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Entry
MYCGRDRAFT_110826 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MYCGRDRAFT_110826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_110826
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
MYCGRDRAFT_110826
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
YL1
FAM117
Motif
Other DBs
NCBI-GeneID:
13402443
NCBI-ProteinID:
XP_003849465
JGI:
Mycgr3_110826
UniProt:
F9XJE4
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All DBs
Position
9:<1484039..>1485160
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AA seq
308 aa
AA seq
DB search
MEDDDDDFYGNGGGEEEAQDAMETEADGKDQKMESDSGSEEDSSDDDVQITLEKPDGAKA
EPPPGSKAAREKAASLKTAAASTTSPSKPSKSSKPQIKKDPSERRGSSAAPNTVKPTLTH
NNKEGKEFPALRSSAVDVNDTPIWPANGKPITAIDIDADLAEHSKPWRLPGTDQTDFFNY
GFDEYTWVQYSLRQQTMGNTIAGLKAEDAQLKAMFGEMGGPGSGGQGGGGGGGGGGMQGM
PPGMPGMPTPEQMQEMMAQGLVPPEFAAMLGMGGGGGMGQQQGGQFGVPAAAGTEWRATT
AMDAAAGE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacgacgacgacttttacggaaacggaggcggagaggaggaggcgcaagat
gcgatggagacggaggcagacggcaaggatcaaaagatggagagcgactctggctcagag
gaggacagcagcgacgatgacgtacaaatcacactcgaaaagcccgacggcgcaaaggca
gaacctcctcccggctcaaaagcagcccgcgaaaaagccgcctccctcaaaaccgccgcc
gcctccacaacctccccctccaaaccctccaaaagcagcaaaccccaaatcaaaaaagac
ccatccgaacgacgaggctcctccgccgctccgaacaccgtcaaacccaccctcacccac
aacaacaaagaaggcaaagagttccccgccctccgatccagcgcagtcgacgtcaacgac
actcccatctggcccgcgaatggaaaacccatcacagccatcgacatcgacgccgacctc
gccgaacactcgaaaccctggcgcttgccggggacggaccagacggactttttcaattat
gggtttgatgagtatacgtgggtgcaatatagtttacggcagcagacgatgggaaatacg
attgctgggttgaaggcggaggatgcgcagttgaaggctatgtttggggagatgggtggg
ccagggagtgggggacaaggcggtggaggaggtggaggtggaggagggatgcaggggatg
ccgccggggatgccggggatgccgactccggaacagatgcaggagatgatggcgcaggga
cttgtgccgccggagtttgcggcgatgttggggatgggtgggggtggggggatgggacag
cagcagggaggacaatttggggttccagccgccgcagggaccgagtggagggcaacaaca
gcaatggatgccgccgcaggggagtga
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