Zymoseptoria tritici: MYCGRDRAFT_111215
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Entry
MYCGRDRAFT_111215 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K12600
superkiller protein 3
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYCGRDRAFT_111215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_111215
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
MYCGRDRAFT_111215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_22
TPR_1
TPR_17
TPR_CcmH_CycH
TPR_16
TPR_8
TPR_14
TPR_11
TPR_12
TPR_7
ARM_TT21_5th
ARM_TT21_C
TPR_9
TPR_MalT
Alkyl_sulf_dimr
Sel1
Motif
Other DBs
NCBI-GeneID:
13396310
NCBI-ProteinID:
XP_003848320
JGI:
Mycgr3_111215
UniProt:
F9XMS5
LinkDB
All DBs
Position
11:483103..487269
Genome browser
AA seq
1388 aa
AA seq
DB search
MSAKAALKAAKAALDNQQYDTVIEQSNQALSTDPSNYFAKLFLGRAYEKQGNFDDSAKNY
RSAAQSKPDDTQGWLGLCSVYEAQESRKVDEYREAAISAAQVFATAEDRERCQTTFDKLR
SFTKKYGTPEQNKKVLKEQLPGSVLYEFLEGRIPHPSHTFTRLAELIEDEEGKFISKEIA
ERRTRIGARVGQVTLDVKREVFRTSELEEVYQQIINWASDDEIRRQYEEKLLERAYETLT
VLPMEEKAAKLDQVLTLAEGMVIIHHPFRLAWDLVLESRDMDELRDLDAGILREYVKVFP
DGGLARIMKGWLTSELSPFPPPPKSEDDDEKDDIFKPMTSEDRLLLLTEGLAVAEQSPLA
HRLVADYYLHIEEHQSAADTSRSGLQTVQTEGNKLGLAFQNTKDALNSVLATSLVHHQAP
RNHPEAKRLFEAILQRKPKFTAALIGLGLIMEENEDYQDAITFFTRALEEDKGNVRVGTE
LAWCRALSGDFSRAAEELEDFLQLIRADDPRTRDLRAQTLYRIGICLWEMDTSKAARKDR
TGAYSRFIAAIKTNINFAPAYTSLGIYYGDYAKDKRRARQCFQKAFELSPAEVSAAERLA
RTFADQGDWEIVEVIAQRVVDSGRTRPPPGSKKKGISWPHAALGVVQMNKQEYQKSIVSF
LAALRISPDEYQPYVGLGESYHNSGRYNSALRTFNYALEPHDKVELKITGERWFAKYMLA
NVHRELGEFEEATQGLLHVLEERPTEFGVLMSLLQTHVEHAWRCVETGLFGRAVQSAKDA
IEIAKKIAEGNTNAFNMWKAVGDACSIFSWVGSANEEFPEDDLRTLLDTSAAAEVYESLA
DVDRVSLEALKKSATNGTTASPTALPKPMVASILAFKRAIHSCSHEINAQAVAWYNLGWA
EQRAHAISDAKTGKKYSSAAVRCFKRAIELEAGNAEFWNSLGVVTTTLNPAIAQHSFVRS
LHLNELNAKVWANLGVLYLLQNDMELAHQAFGRSQSTDPDYAHAWMGEGLIALLTGDSSL
ALSHFTHAFEISDSTSLLVKRHYALSTFDYLLTSPSSSNDLTKLIQPLFALSQLITQSPH
DLPFRHLSALFLERVGSHLNAIEVLTSLCNDAEAEYETTESDAALARFAQAKADLARNQL
AAKSFSNAAESAETALDLSSDADNSGLDADSRRKLRLSAHLTAGLALHNEGKMGESVSMF
KAALEESSNDPDVVCSLVQVLWAQGGSDEKAVAREQLFECVEKSPEHVGAVTLLGAIAAL
DDDQDTAAAVKDDLIVLRTKDGLSTKDISGIETLLSSLAALSPGSEADSLTEAQASILLR
PNDPQAWTNLANLSGEATAAEMALKTAAKAVPPSGDMQASDLSLAFKGVGTLGDSQRGRV
LAPWVGGQ
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccaaagctgccctgaaagcagcgaaagcggcgttggataatcagcaatacgat
accgtcatcgaacaatcaaaccaagcactatcaacggacccttcaaactactttgccaaa
ctgttccttggacgtgcctacgagaaacaaggcaactttgacgactctgccaagaactat
cgctcagcagcacagtcaaaaccagacgatactcaaggatggctgggtctttgcagtgtc
tacgaggcacaggaatcgaggaaggtagatgagtatcgcgaagccgctatcagtgcggcg
caagtatttgctacagctgaggatcgcgaacgctgccaaacgacatttgataaattgagg
tcattcaccaagaaatatggcacgccggagcagaacaagaaagtgttgaaggagcaactt
ccaggcagtgttctgtacgagtttctggaaggcagaattccgcatccgtcgcatacattc
acgcggctagcagagttgatcgaggatgaggaagggaagttcatctcgaaggagattgca
gagcggaggacgaggatcggtgcgagggtgggacaggtcactctggatgtcaagcgggag
gtgttccggacgagcgaactggaagaagtctatcaacagatcatcaattgggccagcgat
gatgagatcagaagacagtacgaggagaagctacttgaacgggcttatgagacgctgact
gttttgccaatggaggagaaggctgcgaagcttgatcaagttctgactcttgctgagggc
atggtcatcatccaccatccttttcgactagcttgggacctggtcctagagtcacgagac
atggatgaactaagagatctggatgctggaattctgcgagagtacgtcaaagtgttccca
gatggcggacttgccaggatcatgaagggttggttgacgagcgagttgtctccattcccg
ccgccgccaaagtccgaagatgacgacgagaaggatgacatcttcaagcccatgacttca
gaagatcgactactcctcttaacggaaggccttgctgttgcagagcagtctccgcttgcg
catcgcctggtcgcagactactatctccacatcgaggagcatcaaagcgcagccgacacc
tctcgttccggattgcagaccgtgcagactgagggtaacaagctcggtcttgcattccag
aacaccaaagatgccctcaattcagtcttggcaacatctctggtccaccatcaggctccg
cgaaaccatcccgaggcaaagcgactgttcgaagcgattctccaacggaaaccgaagttc
acagcagcactaatcggcctaggcttgatcatggaagagaacgaggactatcaagacgcc
attacatttttcacccgagctctggaagaagataaaggcaatgtccgcgtgggtacagag
cttgcttggtgtagagcactaagcggtgatttctcgcgggcggccgaagagcttgaagac
ttcctccagctcatccgagcggatgatcctcggaccagagatctgcgagcgcagactttg
taccgcataggaatatgcttgtgggaaatggacacttcgaaagctgcccgcaaagacagg
actggtgcttactctcgcttcattgctgcgatcaagacgaacatcaactttgcgccggca
tacacaagtctcggaatctactatggcgactacgccaaagacaagaggcgagcacggcag
tgctttcagaaagcgttcgagctgtctcccgccgaggtatccgccgcagaaaggctagcc
aggacatttgctgatcaaggcgactgggaaattgtagaggtcatcgctcagcgagtggtc
gactcaggtcgcactcgtccacctccaggctccaagaagaaaggcatcagctggccgcac
gccgcccttggtgtggtacaaatgaacaagcaggagtaccagaaatccattgtatcgttc
ttggctgcactccgaatcagtccggacgagtatcaaccttacgtcggcctgggagagagc
tatcacaactctgggaggtacaactcggcgcttcgaacattcaactatgctctggaaccg
cacgacaaggtggagttgaagatcactggagagaggtggtttgccaagtacatgcttgcc
aacgtccaccgagagctgggtgagtttgaggaggcgacgcagggcctgctgcatgtcttg
gaggagcgaccaaccgaatttggtgtgctcatgtcgttgctgcagacacacgtggagcat
gcgtggcgatgtgtcgagactggtctgtttggtagagccgtgcagagtgcgaaggatgcc
attgagattgcgaagaagattgcagagggaaacacgaacgctttcaacatgtggaaggcg
gtaggagatgcatgctcgatcttctcttgggtgggaagtgcgaacgaggaattccccgag
gatgatctgcggactctacttgacacaagtgcagctgcagaggtgtacgagtcgctggca
gacgtcgatcgggtttcgctggaggcgctgaagaagtccgcgacgaacggcaccacagca
tcgcctacagcgcttcccaagccgatggtcgcctcaatcctcgcattcaagcgagcaatt
cactcttgctcacatgagatcaacgctcaagccgtagcgtggtataaccttggatgggcc
gaacaacgtgcccatgcgatcagcgacgccaagaccggcaagaagtacagcagcgcggcc
gtccgctgtttcaagcgtgcgattgagctcgaagcaggcaacgcggagttctggaactcg
cttggcgtggtcactaccacccttaatccggccatcgcacagcactcattcgtccgctct
cttcacctcaacgaactgaatgccaaagtttgggccaacctcggcgtcctctacctactg
cagaacgacatggaacttgcccaccaagcattcggccgttcacagagcacagatccagac
tacgctcacgcatggatgggagaaggtctcatcgctctgctcaccggtgactcgtctctg
gccctcagccacttcactcacgcttttgagatctctgattcgacatccctcctcgtcaaa
cggcactacgccctctcgacattcgactacctactcacctctccgtcctcctccaacgac
ctcacgaagctcattcagccgctcttcgccctctcccagcttatcactcagtctccccac
gacctccccttccgccacctctctgccctgttcctcgaacgagtgggctcccatcttaat
gcgatcgaagttcttacatctctttgcaacgacgcagaagccgaatacgagacgaccgag
tctgatgcggctcttgcacgttttgcgcaagcgaaagcagatctcgcgcggaaccaactc
gcagcgaaatctttctccaatgcagcagaaagtgcagagacagcccttgacctttcgtct
gacgcagataactccggtcttgacgccgactcacgaaggaagctccgtctatctgcgcat
cttactgctggattagcgttacataacgagggaaagatgggtgaaagtgtcagcatgttc
aaggccgcactggaggagagcagcaacgatccagacgttgtatgctcgcttgtccaagtc
ctctgggcgcaaggaggttcggatgagaaagctgtcgcaagggagcagttgttcgaatgt
gtggaaaagtcacctgagcatgtcggtgccgtgacgctcttaggtgctatcgctgcgctg
gacgatgatcaagatactgctgcagctgtgaaggacgacttgatcgtgctacggacgaaa
gatggtctctcgacgaaggacatttcgggcattgagacgttgctttcctcattggcagct
ttgtcgcccggatccgaggcagactctctcactgaggcgcaggcatcgatcctgcttcga
ccaaatgacccgcaggcctggacgaacctagcaaacctttcgggagaggctacggctgcc
gagatggcgttgaagacggctgcaaaagctgttccgccaagcggcgatatgcaggccagc
gacttgagtctcgctttcaagggtgtgggcacacttggtgattcgcagagagggagggtg
ctcgcaccgtgggttggtggacagtga
DBGET
integrated database retrieval system
