Zymoseptoria tritici: MYCGRDRAFT_16557
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Entry
MYCGRDRAFT_16557 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYCGRDRAFT_16557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_16557
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MYCGRDRAFT_16557
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
13402538
NCBI-ProteinID:
XP_003849741
JGI:
Mycgr3_16557
UniProt:
F9XJX9
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All DBs
Position
9:complement(<844303..>845157)
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AA seq
285 aa
AA seq
DB search
DRRRINAPPGGTAPPVFATPPDLNLSRPTRTRQPDEHRKIFLRTGVVPSASGSAYYEIPP
ETPSTSNDILVPSSSSLKITCTVHGPRPLPRNAAFSPNMLLTTHVKFAPFATRQRRGYVR
DASERDLGVHLETALRGVIIGERWPKSGCEVVITVLEGEEDGWWGEAGKGGKGGGWGMMN
VLAGCITVASAALADAGIDCVDLVSGGVAALTGDGKEGFVLDPSPSEHDIRAACVVGYLQ
SRDEITELWLKGDSGAQSEMLMDQAVKAATLTRTVLAEAVKEAAE
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gaccgccgccgcattaacgcgcctccgggtggaacagcacctccagttttcgcaacccct
ccagatctcaatctctcccgaccaacacgaacacgacaaccggacgaacaccgcaaaatc
ttcctccggaccggcgtagtcccttcagcaagcggcagtgcctactacgaaatccctccc
gaaactccaagcacatcaaacgatatcctcgttccctcatcgtcgagcttgaaaatcaca
tgcaccgtccacggcccccgccctctgccccgaaatgcagctttcagtcccaacatgctg
ctaacgacacacgtcaaattcgcacctttcgccacccggcagaggcgaggctacgtacgg
gacgcgagtgagcgagacttgggcgtgcacctggagactgctttacgaggggtgattatc
ggcgagaggtggccgaaaagtggatgcgaggttgtgatcactgtgctggaaggggaggag
gatggatggtggggcgaggcgggaaagggagggaaaggtggaggttggggcatgatgaat
gtgttagcgggatgtatcaccgtggcgagtgcggcgctggcggatgcgggtattgattgt
gtggatttggtgtcggggggtgtggcggcgttgacgggtgatgggaaggagggattcgtg
ttggacccgtcgccttcggagcatgatatcagggcagcgtgtgtggtcgggtatttgcag
tcgagggatgagattacggagttatggttgaagggtgattcgggggcgcagtcggagatg
ctgatggatcaggctgtcaaggctgcgactctgacgaggactgtgttggcggaggctgtg
aaggaggctgcggag
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