Zymoseptoria tritici: MYCGRDRAFT_19618
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Entry
MYCGRDRAFT_19618 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03018
RNA degradation
ztr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCGRDRAFT_19618
09123 Folding, sorting and degradation
03018 RNA degradation
MYCGRDRAFT_19618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_19618
03041 Spliceosome [BR:
ztr03041
]
MYCGRDRAFT_19618
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MYCGRDRAFT_19618
mRNA degradation factors
5'-3' decay
Lsm complex
MYCGRDRAFT_19618
Spliceosome [BR:
ztr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
MYCGRDRAFT_19618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
13398117
NCBI-ProteinID:
XP_003856974
JGI:
Mycgr3_19618
UniProt:
F9WYI5
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Position
1:complement(<5251330..>5251596)
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AA seq
89 aa
AA seq
DB search
EKVCLLLTDGRCLIGDLIACDAVTNLALENCVERIIRSADEDEASEEEPRGLFMVRGDNV
VLCGLVDEELDGSIDWTKVRGEEIGGTKH
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
gaaaaagtctgcctcctcctcaccgacggccgctgcctaatcggcgacctcatagcctgc
gacgccgtcaccaacctcgcgttagaaaactgcgtggaacgcatcatccggtccgcggac
gaggacgaagcgagtgaagaggaaccgagaggattgttcatggtgaggggggataatgtc
gtgttgtgtggattggtggatgaggagttggatgggagtattgattggacgaaggttagg
ggggaggagattggggggacgaaacat
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