Zymoseptoria tritici: MYCGRDRAFT_31393
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Entry
MYCGRDRAFT_31393 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCGRDRAFT_31393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ztr03041
]
MYCGRDRAFT_31393
Spliceosome [BR:
ztr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
MYCGRDRAFT_31393
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WDR55
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Tricorn_2nd
Beta-prop_WDR19_1st
eIF2A
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
13395230
NCBI-ProteinID:
XP_003857155
JGI:
Mycgr3_31393
UniProt:
F9WY84
LinkDB
All DBs
Position
1:complement(4096312..4098062)
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AA seq
522 aa
AA seq
DB search
MSIHPSRQAYVEEESQQQQSNESAALDTNYQLPSSGGGPSQNAAIVFDEFARKRRAAALA
VPTDDLRVRTELRARGEPITLFGERKEDRRDRLRELLMGEKDGGDGQREDESMADADESD
DDDEEGEFYIEGSQALLTARKDIARYSLPRTAKRVAHQKAESQIPVATHVKHRKAIKQKL
GEVELFGSQIASERPLSIVRFAPNGEMLACGDWGGSVKLLDVPNLETKMTLRGHKGMIGG
ITWMPTATLPSSTVAPEHLNLASSAADGEIHLWSLTQDTPIATLSGHSARVCRTEFHPSG
KYLASASYDTTWRLWDVNTTTELLLQEGHSKEVYTVSFNEDGSLVASAGLDSIGRIWDIR
TGRTAMLLESHIQPIHALDWSSDGYRVMTGSADGFAKCWDLRAVRETASIGAHVGGVSDL
RWFKGMDGPLSSNASQADTKMTNGDSEHEEMQPKTSGTFIVSAGFDKAVNIFSADDWALC
KSLTGHDGTVLAVDTTADSKWIASCGRDRTVKLWARDDMEGL
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtctatacatccgtcgcggcaggcgtacgtggaggaagagtcacagcagcaacagtcc
aacgagtctgcagccctcgacaccaactaccaattaccttcctctggcggcggaccttct
caaaatgcagcgattgtattcgacgagtttgcgcgaaagcgaagagctgcggcactggct
gtaccgacggacgatctacgagtaaggacggagctgagagcacgcggcgaacccatcaca
ttattcggcgagcgaaaagaggacagacgagaccggttacgagagctattgatgggagag
aaggatggcggtgatggacagcgcgaggacgagtctatggctgatgccgacgagtctgat
gacgacgacgaggagggtgaattctacattgagggcagtcaagcattgttgaccgcgagg
aaggacatcgcacgatattcgcttccacggacagcgaagcgcgttgcacatcagaaagcc
gagagtcagatacccgtggccacacatgtcaaacatcggaaagctatcaaacagaagctg
ggagaggtcgagctgttcggcagtcagattgcaagtgaacggccgctgagcattgtgcga
ttcgcgccaaacggagagatgctggcttgtggagattggggaggaagcgtgaaattactg
gatgtcccgaatttggaaacgaagatgacactgcgagggcacaagggcatgatcggaggc
atcacatggatgccaacagctacattgccttcatcgactgttgcgccggaacatctaaat
ttggcatcgtccgctgccgatggcgagattcatctctggtcgctgacacaagacactcct
atcgcgactctcagcggacatagcgctcgcgtctgtcgaacggaatttcatccttcaggg
aagtatctggcaagtgcgagctacgacacaacctggaggttatgggatgttaacactacg
accgaactgttacttcaggaaggccacagcaaagaagtgtacaccgtcagcttcaacgag
gatggaagcctggttgcctcggcggggctcgattcgattggcagaatctgggatatacgg
acgggacgaacggccatgctacttgagagtcacattcagcccatccatgcccttgattgg
agtagcgatgggtaccgggtgatgaccggtagtgcagatggtttcgcgaaatgctgggat
ctccgagctgttcgggagacagccagcatcggagctcacgtcggtggagtatctgacctt
aggtggttcaagggcatggacggtcctctttctagcaatgcgtctcaagccgacaccaag
atgacgaatggcgactcggagcatgaggagatgcagccgaaaacgagtggcactttcatc
gtgagcgctggctttgacaaggcagtcaacattttctctgctgatgactgggctctgtgc
aagtccctaaccgggcacgacggaactgtgctagcggtggatacgacggcagattcgaaa
tggatcgcttcatgtgggcgtgatcgaacggtcaagctctgggcgagagacgacatggaa
ggactctag
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