Zymoseptoria tritici: MYCGRDRAFT_32502
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Entry
MYCGRDRAFT_32502 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03030
DNA replication
ztr03410
Base excision repair
ztr03420
Nucleotide excision repair
ztr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYCGRDRAFT_32502
03410 Base excision repair
MYCGRDRAFT_32502
03420 Nucleotide excision repair
MYCGRDRAFT_32502
03430 Mismatch repair
MYCGRDRAFT_32502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ztr03032
]
MYCGRDRAFT_32502
03400 DNA repair and recombination proteins [BR:
ztr03400
]
MYCGRDRAFT_32502
DNA replication proteins [BR:
ztr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
MYCGRDRAFT_32502
DNA repair and recombination proteins [BR:
ztr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
MYCGRDRAFT_32502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
AAA_16
AAA_33
nSTAND3
RuvB_N
AAA_14
BRCT_2
AAA_18
AAA_28
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
13399171
NCBI-ProteinID:
XP_003857232
JGI:
Mycgr3_32502
UniProt:
F9X078
LinkDB
All DBs
Position
1:complement(3601275..3604610)
Genome browser
AA seq
1078 aa
AA seq
DB search
MPPDIRSFFGGKPAGTAAPTPSKPDEPSKKRGRARKVVDDDEDEEDVPVAKKKSTPSKAK
AKQPDPVAEETTADDFFGSGKPKRSEAMRPKTRERAGTGGSVKEETPKKKAAAKGKAAKA
TPNGRSSTRVKKESNYAELDSNDFPDDDMEDAAEDVFKAGAATRRRLGDDYEEASDDDDA
VIVPRKNGSGRQKKKKDEDEDGFDPDRDTDMKDDVLEHQPTKKTSSKSINKRKSAAMHDE
DDLDLEVEEAKPAKKRASPAKKAPAAKKQKKAEVEDSAELKAIFASIPTIDAPPPPPKDD
DDGEGKKKFQFGQHANSAVPAGAIDPTDLPSGQDNCLAGLTFVFTGQLSRLGREQGQNLV
KQYGGKVTTAPSKKTSYVVLGEDAGPKKLETIKNYNLKVINEDGLFALIQKLPANGGDSA
AAEKQAEKIAKEEEKVREAAAEMDRQEKAQRAAQAAQAAKAAKASSSVTQSAPQKAKAPV
NPDAPDSRLWTVRYAPQSLNQICGNKTQVEKIQTWLRMFPKNQRTGFKMPGKDGSGTHRA
IMIHGPPGIGKTTAAHLVAKLEGYDIVESNASDTRSKKLVETGLKGVLSTTSLMGYFSRG
VDDVEASKKKLVLIMDEVDGMSAGDRGGVGALAAVCKKTQVPMILICNDRKLPKMKPFDF
VTYDVPFRRPTTDMIRSRITTIAYREGLKMPANVINALIEGSGADIRQVVNMISTAKLDE
QNLSYEDSKDMSKAWQKHIILKPWDMVGKILGGGLFNPAANSSLNDKTELYFNDHDFAPL
MLQENYLGSNPQRSNRFNSNPKMKRLAELDLVSKAAESISDGDLVDRMIHGSQQQWSLMP
AHAIFSFVRPASFVYGTLAGHQTRFTAWLGKNSNQGKLSRFIKEIQGHMRLRVSADRHEI
RQTYMPLLFEKLVKKLQTDGKDAVPEIIELMDSYFLTKEDWDAILELGVGDSDMEKIKIE
TQAKSTFTRLYNQQSHPLPFMKASQVVAPKKAPAQDKPDLEEAFEVSEDEAPDDADVKDE
DQELDLSKDKYVKQPKKKKASAKAGASKKKKGAKGDDDDGDEEEEKPKKGKGKGRAKK
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccgacatccgctccttcttcgggggcaaacctgctggcaccgcagctcccact
ccctcgaagcctgacgaacccagcaagaagcgcggccgagcgaggaaggttgtggacgat
gacgaagacgaggaagacgtaccagtagccaagaagaagtctacaccctcaaaagccaaa
gcaaagcaaccagaccctgtggcggaggagacgactgcagacgatttcttcggctctggc
aagcccaaacgctctgaagcgatgcggccaaagacacgtgagagggccggtactggagga
agtgtcaaggaagagacgccaaagaagaaggctgcggcaaaaggcaaggccgcaaaagct
acaccgaatgggaggagctcaacacgtgtcaagaaggagtcgaactacgcagaactagac
tccaacgacttccccgatgatgacatggaggatgctgctgaggatgtgttcaaagccggt
gccgctactcgtcgacgtcttggcgatgactacgaggaggccagtgacgatgacgacgca
gtcatagtgcctaggaagaatggcagtggcaggcagaagaagaaaaaggatgaagacgaa
gatggtttcgacccagatcgtgacacggatatgaaagatgatgtcctggaacatcagcca
acgaagaagacatcgagcaagagtatcaacaagcgaaagtcagcggcaatgcatgacgag
gatgatctagatctcgaagtcgaagaggcaaagccggcgaagaagcgcgcatcgcctgcg
aagaaggcaccggctgcgaagaaacagaagaaagccgaggtcgaagacagtgccgagctg
aaggctatctttgccagcattcccacaatcgatgctccacctcccccgccgaaggacgat
gacgatggagagggcaagaaaaagtttcaattcggccaacacgcaaactcggccgtgcca
gcaggagcaattgacccgacggatctcccatctgggcaagacaactgcttggcgggcctt
acctttgtattcaccgggcaattgtcgcgcctcggaagagagcaaggccaaaatcttgtc
aagcagtacggtggcaaggtcaccaccgctccgtcgaagaagactagctacgttgtcctt
ggcgaggatgctggaccgaagaaactcgagacaatcaagaactacaacttgaaggtaatc
aacgaggatggcctctttgcgctgattcaaaaattacctgcgaatggcggagacagcgcg
gcggccgagaaacaggccgagaagattgcaaaggaagaagagaaggtgcgtgaggctgcc
gccgaaatggaccgtcaggagaaagctcaacgagctgcccaagctgcacaagcagccaag
gctgccaaagcatcttcgtctgtgacccagtccgcaccgcaaaaagccaaggctccagtg
aatccagatgctcccgactccaggctgtggacagtccgatacgcgcctcaatcgctcaac
caaatctgcggcaacaagactcaagttgagaagatccagacctggctgcgcatgttccca
aagaaccagaggacgggtttcaagatgcctggaaaggatgggagcggcactcacagagca
atcatgattcacggtcctcccggtattggtaaaactaccgctgctcatctggtggccaag
ctcgaaggatacgacatcgtggagtccaacgcatctgacacgcgttcgaagaaactggtg
gagacaggtctcaaaggcgtcctctccaccacctccttgatgggctatttctctcgtggt
gttgatgacgtggaggcttcgaagaagaagcttgtgctcatcatggatgaggtcgacggc
atgagtgcaggtgatcgtggcggtgtcggtgcactggctgctgtgtgcaagaagacacag
gttccgatgattctcatctgcaatgatcgcaaactgccaaagatgaagcccttcgacttc
gtcacatatgatgtgcctttccgccgtccaacgaccgacatgattcgcagtcgaatcact
accatcgcataccgcgaaggcctcaagatgccagcgaatgttatcaacgcgctgatcgag
ggttctggcgcggatatccgtcaggttgtcaacatgatcagcaccgccaaactcgacgag
cagaatctctcgtacgaggacagcaaggacatgagcaaagcctggcagaagcacatcatt
ctgaagccctgggacatggttggcaagatccttggcggtggactgttcaatcccgcggcc
aattcttcgctgaacgacaagacggagctttacttcaacgatcacgacttcgcgcctctt
atgttgcaggagaactaccttggttcgaatccacagcgctcgaaccgcttcaatagtaac
cccaagatgaagaggctggcagaattggacctcgtcagcaaggcagcggagtccatcagc
gacggtgacctcgtggatcgcatgattcacggcagtcagcagcaatggtctctgatgcca
gcgcatgctatcttcagttttgtccgtcccgcgagctttgtgtacggcaccctggctggc
catcaaacacgcttcaccgcgtggctgggtaagaactctaaccaaggaaagctctcgcgt
ttcatcaaggagattcaaggccacatgcgcctacgcgtttccgcggatcgtcacgagata
cgacagacatatatgccactcttgttcgagaagctcgtcaagaagcttcagacggacggc
aaagacgccgtgccggagatcatcgaattgatggattcatacttcttgacgaaggaggac
tgggatgctatcttggaactgggtgttggcgactccgacatggagaagatcaagatcgag
acgcaggccaaatcgacctttacccgattgtacaatcagcagtctcacccactgccgttc
atgaaggcttcgcaggtcgtggcaccgaagaaagcgcctgctcaggacaagcccgatttg
gaggaagcgtttgaagtatccgaggacgaggctcccgatgatgcagatgtcaaagatgaa
gatcaagagctcgatctcagcaaggacaagtacgtcaagcagccgaagaagaagaaggct
tctgccaaagccggcgcgagcaagaagaagaaaggtgccaaaggcgacgacgacgatgga
gatgaggaagaggagaaaccgaagaagggcaaaggaaaaggccgcgcaaagaagtga
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integrated database retrieval system
