Zymoseptoria tritici: MYCGRDRAFT_33937
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Entry
MYCGRDRAFT_33937 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCGRDRAFT_33937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ztr03041
]
MYCGRDRAFT_33937
Enzymes [BR:
ztr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MYCGRDRAFT_33937
Spliceosome [BR:
ztr03041
]
Complex A
U2 snRNP components
U2 related factors
MYCGRDRAFT_33937
Complex B
MYCGRDRAFT_33937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
DUF5415
Motif
Other DBs
NCBI-GeneID:
13402847
NCBI-ProteinID:
XP_003857276
JGI:
Mycgr3_33937
UniProt:
F9WY46
LinkDB
All DBs
Position
1:complement(3363514..3367212)
Genome browser
AA seq
1145 aa
AA seq
DB search
MGRSPNGYRRDEDRRRDGRSHRRSPSRDVRAHSPNSYRTDFDHNQRREDRDGRGARRDRS
RDRDSGRGEDRGDSRYHDRPKERHRDSDRDRYDSRRGERRSRDYSPKMAAVKAEEEKRTA
AEKALQEERRAKLEAWKKDVLAKKMAKATSDAGGSSIPASPAPDSPAPSNPATVEEAPPA
PVPQLEAKPRLKFDPKEIKRRTEVKMAKMRGDASTLDAGAVPAMKNGAASMGRIPDQPVK
GNQHPPSAKSGALVGDVKMSGFGLNKGAAEKTAAAMRNATTFDDEEEDHRKLKKLSQLPE
VESAGDAMYANDDENDQDEQTAISGDLSEEAEAKAARKAARRRAKQAQKEQNDITMGNTE
DTATTVAVTVARDSQADKMDEDEEMDPLEAFMSNLDQVEAPREIKGGKRVNQEFSLDDGP
DFDAVGDDTEDLLLNPRHKRKEVPNTDHSKVNYEEIRKKFYAESAEIADMTTEDVEKMRA
ELDNITVHGVDIPKPITKWSQCGFPAQVIEVINEQKFENPTAIQSQALPALMSGRDTIGI
AKTGSGKTLAFILPMFRHIKDQRPVANLEGPIGLIMAPTRELAVQIHRECKPYLKALGLR
GVCAYGGAPIKEQIGELKRGAEVIVCTPGRMIDLLAANSGRVTNLRRVSYVVLDEADRMF
DMGFEPQITKMLGNIRPDRQTVLFSATFPKKMESLARKALTKPVEILVGGRSVVAPEITQ
MIEVRPEETKFVRTLQLLGDLIEGDEEARSLIFVERQETADLIFKQLGKKGYPSVSVHGG
REQIDRDQAIIDFKAGIFPIMVATSVAARGLDVKQLKLVINYDCPNHGEDYVHRAGRTGR
AGNTGTAVTFVTPAQERYAGFLVRALEDSKQEVPDELREMAKVYKEKVASGEASFHSSGF
GGHGVERYDAARAAERAREKKIYKTGDEPEDEEDVKDKKSKESEVDKLLAKAAGGVKATD
MAAAEEPTAPPAGVASLRSDLAAHLDRAMKVEKVEAAPASSTSAINDPLAKAAAAAASIN
NRLGTKGTRPGAPPENRGPDAGAFHATLEINDFPQKARWAVTNRSNVAKILEATGTSITT
KGSYQDPSKPVPEGQSKLFILVEGDTEIVVSSAMKMLTEKLREGMLIAQENEARGGGGGG
RYRVV
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgggccgctcaccaaatggttataggagagatgaagaccgccgccgcgatggtcgaagt
catcgtcggtcaccaagccgtgatgtaagagcacactcgccgaactcatacaggacagac
tttgaccacaatcagcgccgcgaggatcgagatggacgaggagcacgccgggacagaagt
cgggaccgcgacagcggacgtggagaggatcgaggcgactcgcgatatcatgaccggccg
aaggagcgtcaccgagacagcgaccgtgaccggtacgattccaggcgcggcgaacgcaga
agcagggactattccccgaagatggcagccgtaaaggccgaagaggaaaagcgaaccgca
gcagagaaggctttacaggaagaacgacgcgccaaactcgaagcatggaagaaagacgta
ttggcgaagaagatggccaaagcgacttccgacgctggcggatcctctattccagcatcg
ccagctcccgattcgcccgctccgtcaaacccagctacagtggaagaggcccctcctgca
ccggttccacagctcgaagctaagccacgattaaagtttgatcccaaggaaatcaagcgt
cgtactgaggtcaagatggccaaaatgagaggcgatgcctctacactggatgcgggagct
gttccagcgatgaaaaatggagccgcgtctatgggacgcattcctgatcagcctgttaag
ggaaaccaacatccgccatcagccaaatcaggagcactcgtcggtgatgtgaagatgagc
ggattcggcttgaacaagggcgccgcagagaaaaccgctgccgctatgcgtaacgcaact
actttcgacgacgaagaggaagaccatcgaaagcttaagaagctctcgcagctccctgaa
gttgagtctgctggcgacgcaatgtatgctaatgatgacgagaatgatcaagacgagcag
accgccatctccggtgacctcagcgaggaagccgaggcgaaggctgcaagaaaggcggct
cgaagacgtgcgaagcaggcacaaaaggagcaaaatgacattacgatgggcaataccgaa
gacacggcgacgaccgttgctgtaacggttgcgcgagacagccaggcggacaaaatggac
gaagacgaggagatggaccccctcgaagccttcatgagcaatctggaccaggttgaagct
ccccgtgagatcaaaggtggcaagcgcgtcaatcaagaattcagtctggacgacggtccg
gacttcgatgcagtcggcgacgataccgaagacttgttgctgaatcctaggcacaagcgg
aaggaagtacccaacacggatcacagcaaggtgaattacgaggagattcgcaagaagttc
tatgccgagtcggctgaaatcgccgacatgaccacagaggacgtcgagaagatgcgagcg
gaactggacaacattaccgtgcatggtgtcgacatccccaagccgataaccaaatggtcg
caatgtggatttccagcacaggtcatcgaggttatcaacgagcagaagtttgagaatcct
acggcaattcagtcgcaggctcttcccgcgctcatgtccggccgtgacacgattggtatt
gccaagactggatccggcaagactctggccttcattctgcccatgttcaggcacatcaag
gatcagcgtcccgtcgcaaacctggaaggcccaatcgggctgatcatggccccgactcga
gagcttgcagttcagatccatcgtgagtgcaaaccatacctcaaagcactgggtcttcgt
ggagtttgtgcctacggcggtgcgccaattaaggagcaaatcggtgagctgaagcgcgga
gctgaagtcattgtatgcacgcctggccgtatgatcgatctcctcgctgccaactccggg
cgcgtgacgaacttgcgccgagtgagctacgtggtgttggatgaagccgaccgcatgttc
gacatgggtttcgaaccacaaatcaccaagatgctgggcaatattcgaccagatcgtcaa
acggtgctattttctgccacgttcccaaagaaaatggaatctctcgcgcgcaaagctttg
acgaagcctgtcgagattctcgtgggtggccgaagtgttgtcgcgcctgagatcactcaa
atgatcgaagtccgaccagaagagacgaagtttgttcgcacattgcaactgcttggtgat
ctgattgaaggagatgaagaagctcgctctttgatattcgtcgagaggcaggagactgct
gacctgatcttcaagcagcttggcaagaaaggctacccaagcgtgtcagttcacggtggc
cgcgaacaaatcgatcgtgaccaagcgatcattgacttcaaggctggcatctttcccatc
atggtggcaacttcggtcgcggctcgtggcttggacgtgaagcagctgaagcttgtgatc
aactacgattgtcccaaccacggagaggactatgttcatcgagctggtcgtacaggtcgt
gctggaaatacaggcaccgcagtgacctttgtcactccagcccaagagcggtacgctggt
ttcctcgtccgcgcactcgaggacagcaagcaagaagttccagacgagctcagagaaatg
gccaaagtctacaaggaaaaggtcgccagcggagaggcatcctttcacagctcgggtttc
ggaggtcacggtgtcgagcgctacgatgctgcacgcgcggcagagcgtgcgcgtgagaag
aagatatacaagaccggtgatgagccagaagatgaggaagacgtcaaggacaaaaagagc
aaggagtccgaggtggataagctgttggccaaggctgcaggcggcgtcaaagctaccgac
atggccgctgcggaagaacctacagcaccacctgccggcgttgcctccttgcgctcggat
ctcgctgcccatctcgatcgcgccatgaaggtcgagaaagtcgaggccgctcccgcatcc
tccacgtccgcaatcaacgatccactagccaaagccgccgctgctgctgccagcatcaac
aacagactaggcaccaaaggcacgcgaccgggcgcaccgcccgagaaccgcggccctgac
gccggcgcctttcatgcgaccctcgagatcaatgactttccgcaaaaagctcgctgggcc
gtcaccaaccgtagcaatgtggccaagatcctcgaggcgacgggaacatcgatcacgacg
aaagggtcgtaccaggatccgagcaaacctgtgccagaggggcagagcaagctgttcatt
ctggtggagggcgatactgagattgtggtgtcttcggcgatgaagatgttgacggagaag
ctgagggaggggatgttgattgcgcaggagaatgaggcgagaggtggaggtggaggtgga
cggtatcgtgttgtgtag
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integrated database retrieval system
