Zymoseptoria tritici: MYCGRDRAFT_36432
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Entry
MYCGRDRAFT_36432 CDS
T02285
Symbol
HCP2401
Name
(RefSeq) histone deacetylase complex protein
KO
K14324
histone deacetylase complex subunit SAP18
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03013
Nucleocytoplasmic transport
ztr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MYCGRDRAFT_36432 (HCP2401)
03015 mRNA surveillance pathway
MYCGRDRAFT_36432 (HCP2401)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_36432 (HCP2401)
03036 Chromosome and associated proteins [BR:
ztr03036
]
MYCGRDRAFT_36432 (HCP2401)
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MYCGRDRAFT_36432 (HCP2401)
Chromosome and associated proteins [BR:
ztr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
MYCGRDRAFT_36432 (HCP2401)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
13403608
NCBI-ProteinID:
XP_003854839
JGI:
Mycgr3_36432
UniProt:
F9X2S0
LinkDB
All DBs
Position
2:<1090252..>1091061
Genome browser
AA seq
269 aa
AA seq
DB search
MASLRPEAGTTIDRATTAPFLLRLYWRQNRQLDPWEFSVAVPSDTTNIPDYSSLLPRDVK
GHMMQIYTWPNCTLAELTTLFLSVLPENVIPNPAVGTRLVFKLIFPDTRATIAEGGRGKF
IDKPLGSVVIGGSRAEMADDGAENGDVTETFEGDAHKTLAEARFVIGDYVACSVYPPDQD
GRVAPMPPPTSRGGFGGPRGGPPRENGFGGGYGRGGGGGYRGGYGGRGGGGYGAPPPSGD
WRRGERPPEGGYDDRRGGGGYRDRGGRPY
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcttcgacccgaagcgggcaccacaattgaccgcgcgacgaccgcacccttc
ctcctccgactctactggcggcagaatcgtcaactggatccgtgggagttcagcgtggca
gtgccgtccgacaccacaaacattccggactactcttcgctcctccctcgagatgtcaag
ggacatatgatgcaaatctacacgtggccaaactgcactctcgctgagctcaccactctt
ttcctgagcgtacttccggagaacgtcattccgaatcctgcagtcggcacgcgattggtg
tttaagctcattttcccggacacacgcgctacaatcgcagaaggaggtcgcggcaaattt
atcgacaaaccattgggaagcgtggtcatcggaggaagtcgggcagagatggcagacgat
ggagcagagaacggagatgttacagagaccttcgagggagatgcgcacaagacgctcgca
gaagcgcggttcgtcattggagactacgttgcttgctcggtctacccacctgaccaggac
ggacgggttgcaccaatgccaccacccacttcaagaggtggctttggcggcccaagaggg
ggtcctccgcgggagaatggctttggcggtggttacgggcgaggaggaggcggtggttac
aggggtggttatggaggtcgaggtggaggaggatatggcgcccctccaccaagcggtgat
tggaggagaggtgagcggccgcctgagggaggttatgacgacaggcgcggtggcggtgga
tatcgcgatagaggtggacggccgtactag
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integrated database retrieval system
