Zymoseptoria tritici: MYCGRDRAFT_43883
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Entry
MYCGRDRAFT_43883 CDS
T02285
Name
(RefSeq) DNA repair helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03022
Basal transcription factors
ztr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MYCGRDRAFT_43883
09124 Replication and repair
03420 Nucleotide excision repair
MYCGRDRAFT_43883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ztr03021
]
MYCGRDRAFT_43883
03036 Chromosome and associated proteins [BR:
ztr03036
]
MYCGRDRAFT_43883
03400 DNA repair and recombination proteins [BR:
ztr03400
]
MYCGRDRAFT_43883
Enzymes [BR:
ztr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
MYCGRDRAFT_43883
Transcription machinery [BR:
ztr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MYCGRDRAFT_43883
Chromosome and associated proteins [BR:
ztr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
MYCGRDRAFT_43883
DNA repair and recombination proteins [BR:
ztr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MYCGRDRAFT_43883
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
DEAD
ResIII
nSTAND3
HsdM_C
Motif
Other DBs
NCBI-GeneID:
13401873
NCBI-ProteinID:
XP_003851687
JGI:
Mycgr3_43883
UniProt:
F9XEJ8
LinkDB
All DBs
Position
6:complement(<2581189..>2583594)
Genome browser
AA seq
801 aa
AA seq
DB search
MKFFIEDLPVLFPYPRIYPEQYAYMCDLKRTLDSGGHCVLEMPSGTGKTVSLLSLIVAYQ
QFYPEHRKLIYCSRTMSEIEKALAELKALMKYRADQLGEVEDFRGLGLTSRKNLCLHPSV
KREKSGSVVDSRCRSLTAGFVKEKKERGEDVDLCIYHDNLDLLEPHNLIPPGVWTLDGML
RYGEQQKQCPYFTARRMMPFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDN
VCIESLSIDLTEDSLRKAARGASNLERKITEMKDTDAEKLQNEYAKLVEGLREADEARDE
GAFMSNPALPDDLLKEAIPGNIRRAEHFTAFLKRFIEYLKTRMKVLHVISETPPSFLQHL
KELTFIEKKPLRFCAERLTSLVRTLELSNIEDYQPLQEVATFATLVATYDTGFLLILEPY
ESDTATVPNPILHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLGFTAVVQESY
AMTLARRSFLPMIVTRGSDQGQMSSGFQTRSDPGNIRNYGALIIEFSKLTPDGIVVFFPS
YLYMESVISMWQGMGILDQVWKSKLILVETPDSQETSLALETYRTACSNGRGAVLLCVAR
GKVSEGIDFDHHYGRTVLCIGVPFQYTESRILKARLEFLRETYRIRENDFLSFDAMRHCA
QCLGRVLRGKDDYGVMVMADKRFAKKRTQLPKWIGSAMMESDANMSVDQAVAAAKKFLKN
MSKPFPAKLQDGISTWSYEDLMEHQSKQHAQEKLQELNGGADIDGYAGDQVMADAQRNGD
DDEFDMGEDPDMSAAMMELDA
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcttcatcgaggacctcccggtcctcttcccgtatcccaggatctacccggag
caatatgcatacatgtgcgatctcaagcgcacgctggacagcggaggtcactgcgtactg
gagatgccttcgggaacaggaaagaccgtatctctgctatcgctcatcgtggcgtaccag
cagttctacccagaacatcgaaagctcatctactgctctcgtacgatgtccgagattgaa
aaggctttggcggaattgaaggctttgatgaagtatcgggcagaccagctgggcgaggtg
gaggacttcagaggtcttggtctcacaagtcgaaagaatctctgtttacatccgtcggtg
aagcgtgagaagagtggctcagtggtggactccagatgtcgaagtctgacggctggattc
gtgaaggagaagaaggagcggggagaggatgttgacctttgcatttatcacgacaacctg
gatctgctggagccgcacaatctcatcccgcctggcgtttggacactcgacgggatgctt
cgatacggcgaacagcagaagcaatgcccatacttcacagcaagacgaatgatgccgttc
tgcaatgtgatcatctactcctaccactatctactggatcccaagatcgccgagagagta
tcgaaagagttgtcaaaagattgcatcgtggtttttgacgaagctcacaacatcgacaac
gtttgtattgaatctctgagcattgacttgacagaggactcgttgaggaaggccgctcga
ggagccagcaacttggagcggaaaattaccgagatgaaggatactgatgctgaaaagctt
cagaacgaatatgcaaagctggtggagggtctgcgagaagcagatgaggcccgagacgaa
ggtgccttcatgtcaaatccggcgctcccagatgatctgctcaaagaagccattcccggc
aatattcgacgagcggagcacttcactgcattcttgaaacgcttcatcgagtacctcaag
acgcgcatgaaagttctgcatgtcatctccgagacacctccttccttcttacagcatctg
aaggaactcacattcatcgagaagaagcctctacgcttctgtgccgaacgactcacctca
cttgtgcgcacgttggagctcagcaatatcgaagactaccagccattgcaagaagtcgcg
acgttcgcaactcttgtcgccacctacgacacaggcttcctgctcatcctggagccctat
gaatctgataccgcaaccgtcccgaatcccattctccacttcacttgtctcgatgccgcg
atcgcaatcaagccagtctttgaccgcttcagctcggtcatcatcacgtcgggaactatc
tctccgctcgaaatgtatcccaagatgctgggtttcaccgcagtggtgcaagaatcatat
gcaatgacactcgccagacgctctttcttacccatgatcgttacgagaggttcagatcag
ggtcaaatgtcctccggcttccaaactcgaagcgatcccggcaacattcgcaactacggc
gctttgatcattgagttctcgaagctgacgcccgatggcatcgtggtcttcttcccttca
tatctgtacatggagagtgtcatctcaatgtggcagggaatgggaatcctcgaccaagtc
tggaaaagcaaattgatcctggtcgagacaccagatagtcaggaaacctctcttgcgctc
gaaacgtaccgaacagcctgcagcaacggcagaggcgcagtgctactctgtgtcgcccgt
ggcaaagtctctgaaggcatcgatttcgaccaccactacggtcgaaccgtgctatgtatt
ggcgtacccttccaatacaccgagtccaggattcttaaagctcgtcttgagttcttacga
gagacctaccgcatcagagagaacgacttcctatccttcgacgccatgcgacactgcgcc
caatgtctgggtcgtgtcctgcgcggtaaggacgactacggagtcatggtgatggcggac
aagcgattcgccaagaagcgcacgcagctcccgaagtggatcggcagcgcgatgatggaa
agcgacgcaaatatgtcggtcgaccaggccgttgctgcggcgaagaagttcttgaagaac
atgagtaagccgttccccgcgaaattgcaggatggcatcagtacgtggagctacgaggac
ttgatggagcaccagagtaaacagcatgcgcaggagaagctgcaggagctgaatggcggc
gccgatattgatgggtatgcaggcgaccaagtcatggctgacgctcagcgcaacggtgat
gatgatgagttcgacatgggcgaagaccctgacatgagtgctgcgatgatggagttggat
gcttga
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