Zymoseptoria tritici: MYCGRDRAFT_55128
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Entry
MYCGRDRAFT_55128 CDS
T02285
Name
(RefSeq) AAA family ATPase CDC48
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ztr
Zymoseptoria tritici
Pathway
ztr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MYCGRDRAFT_55128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_55128
03009 Ribosome biogenesis [BR:
ztr03009
]
MYCGRDRAFT_55128
04131 Membrane trafficking [BR:
ztr04131
]
MYCGRDRAFT_55128
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ztr04147
]
MYCGRDRAFT_55128
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MYCGRDRAFT_55128
Ribosome biogenesis [BR:
ztr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MYCGRDRAFT_55128
Membrane trafficking [BR:
ztr04131
]
SNARE
SNARE associated proteins
Others
MYCGRDRAFT_55128
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MYCGRDRAFT_55128
Exosome [BR:
ztr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MYCGRDRAFT_55128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_33
RuvB_N
AAA_16
AAA_2
AAA_5
TIP49
AAA_22
AAA_14
RNA_helicase
CDC48_2
Mg_chelatase
nSTAND3
ATPase
AAA_28
AAA_7
Parvo_NS1
NPHP3_N
AAA_17
IstB_IS21
AAA_18
AAA_24
DUF815
Vps4_C
AAA_25
ResIII
PhoH
SLFN-g3_helicase
ABC_tran
KAP_NTPase
Zot
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
13403555
NCBI-ProteinID:
XP_003854896
JGI:
Mycgr3_55128
UniProt:
F9X4C5
LinkDB
All DBs
Position
2:1422797..1425687
Genome browser
AA seq
822 aa
AA seq
DB search
MSGEPDHAASKGKVKLNDPSGAEKRDENETATAILKKKKKPNSLIVTDATTDDNSILALS
NNTMEQLQLFRGDTVLVKGKKRKDTVLIVLADDDLDDGSARMNRVVRHNLRVKLGDVVTV
NPCPDIKYAKRIAVLPMADTIEGLTGSLFDVFLAPYFREAYRPLRQGDLFTCRAAMRTVE
FKVVEVDPPEYGIVAQDTVIHCEGEPIQREDEEGNLNEVGYDDIGGCRKQMAQVRELVEL
PLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGES
ESNLRKAFEEAEKNSPAIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARANVV
VMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILQIHTKNMKLGDDVDLEQIAAE
THGYVGSDIASLCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTQENFSFALGVSNPS
ALREVAVVEVPNVRWEDIGGLEDVKRELIESVQYPVDHPEKFLKFGLSPSRGVLFYGPPG
TGKTLLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDS
IAKSRGGSQGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDNALCRPGRLDT
LVYVPLPDQEGRESILKAQLRKTPVAPDVDIAFIASKTHGFSGADLGFITQRAVKLAIKE
SIGIAIEKDKAREAAAGDGDDTKMEEDIDEEDPVPELTKRHFEEAMAMARRSVTDTEIRR
YEAFAQSMKNSGGGSAFFRFPEGTDGGAAEQQNGAAEEDLYE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagagccagaccacgcggcctccaagggcaaggtcaagctcaacgacccgagc
ggtgccgagaagcgcgatgagaatgagaccgccacagccatcctcaagaagaagaagaag
ccaaacagcttgattgtcaccgacgccaccaccgatgacaactccatccttgcgctatcg
aataacactatggagcagcttcagctgttccgcggcgacactgtcttggtgaagggcaag
aagcgcaaggacaccgtgctcatcgtcctcgcagacgacgatctcgatgacggctctgca
cgaatgaaccgtgtcgtccgccacaacctccgcgtcaaactcggcgacgttgtcacagtc
aacccatgccccgacatcaagtacgccaagcgcatcgcagtcctgcccatggccgatacc
atcgagggtctcaccggctccctcttcgacgtcttcctcgctccctacttccgcgaagcc
taccgacccctccgacaaggcgatctcttcacttgccgcgctgccatgcgcacagtcgag
ttcaaggttgtggaggtcgacccaccagaatacggaattgttgcacaggacaccgtcatc
cactgcgaaggcgagcctatccagcgcgaggacgaggagggcaacctcaacgaggttggc
tacgatgacattggtggctgcagaaaacagatggcacaggttcgcgagctcgtcgagctt
ccgttgagacatccacaactcttcaagtccatcggtatcaagccaccgcgtggaattctc
atgtacggtcctcccggtactggaaagacattgatggctcgtgccgtcgccaacgagacc
ggtgctttcttcttcctcatcaacggtccagaaatcatgtccaagatggctggtgagtcc
gagagcaatctccgcaaagccttcgaggaggccgagaagaacagcccagcaatcatcttc
atcgacgagattgattccatcgcgccgaagcgtgacaagaccaacggtgaagtcgagcgc
cgtgtcgtttcccagctgctcaccctcatggacggcatgaaggctcgcgccaacgtggtc
gtcatggccgccaccaaccgcccgaactccatcgatcccgcccttcgccgattcggtcgc
tttgatcgcgaagtcgacatcggcattcccgacccaactggacgtctcgagattctccaa
atccacaccaagaacatgaagctcggagatgatgtcgacctcgagcagatcgccgccgag
acccatggttacgtcggttcggatatcgcgtcgctgtgctctgaggctgccatgcagcag
attcgtgagaagatggacttaattgatttggacgaggatactatcgatgcggaggtgctt
gatagcctgggtgtcactcaggagaacttcagcttcgcccttggcgtcagcaacccaagc
gctctgcgcgaggttgccgtcgtcgaggtgccgaacgtgcgctgggaggatatcggtggt
ctggaggacgtcaagcgcgaactcattgagagcgtgcaataccccgtcgaccacccggag
aagttcctcaagttcggtcttagcccgtctcgtggtgtgctcttctacggaccaccaggt
actggtaagacgcttctcgccaaggccgtggccaacgagtgcgccgccaacttcatctcc
gtcaagggacctgagcttctcagcatgtggtttggagagtccgagagcaacatccgcgac
atcttcgacaaggctcgtgctgctgcgccttgcgtggtcttcctcgatgagttggattcg
atcgccaagtctcgtggtggctctcaaggtgatgccggtggtgcatctgaccgtgtcgtc
aaccagcttctcactgagatggacggtatgaccagcaagaagaacgtcttcgtcatcggc
gctaccaaccgtccagagcagctcgacaacgcgctctgccgtcccggccgcctcgacact
ctcgtctacgtcccacttcccgaccaggagggtcgtgagagcatcctcaaggctcagctc
cgcaagacgccagtcgctcccgacgtcgacattgcattcatcgccagcaagacccacggc
ttctccggtgccgatttgggcttcatcactcagcgtgccgtcaagctcgccatcaaggag
agcatcggcatcgcgatcgagaaggacaaggctcgtgaggccgcggccggcgacggtgac
gacaccaagatggaggaggacattgacgaagaggaccccgttccggagctcaccaagcgt
cacttcgaggaggctatggccatggctcgtcgttccgttaccgacaccgagattaggcgg
tacgaggcattcgcccagagcatgaagaacagcggcggtggcagtgcgttcttccgcttc
ccagagggtactgacggtggtgcggccgagcagcagaatggtgccgccgaggaggatctt
tacgaataa
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