Zymoseptoria tritici: MYCGRDRAFT_55886
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Entry
MYCGRDRAFT_55886 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03018
RNA degradation
ztr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCGRDRAFT_55886
09123 Folding, sorting and degradation
03018 RNA degradation
MYCGRDRAFT_55886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_55886
03041 Spliceosome [BR:
ztr03041
]
MYCGRDRAFT_55886
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MYCGRDRAFT_55886
mRNA degradation factors
5'-3' decay
Lsm complex
MYCGRDRAFT_55886
Spliceosome [BR:
ztr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
MYCGRDRAFT_55886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
13400723
NCBI-ProteinID:
XP_003855145
JGI:
Mycgr3_55886
UniProt:
F9X381
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All DBs
Position
2:3054402..3055208
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AA seq
83 aa
AA seq
DB search
MDKDINVKFNGGREVTGTLKGYDQLMNLVLDNVKEMTRDEEGNTSSRSLGLLVVRGTLLV
LISPLDGSEEIANPFVVQDDDDE
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggacatcaatgtgaagttcaacggcggcagagaagtaacggggactttgaag
ggatatgatcagctcatgaatctggttctggacaatgtcaaggaaatgacaagagatgag
gagggcaacacaagttctcgctctcttggtctcctggtggtccgcggcacattactggta
ttgatctcgccactggatggaagcgaggagattgcgaatccattcgtggtccaggatgac
gacgacgaataa
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