Zymoseptoria tritici: MYCGRDRAFT_60826
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Entry
MYCGRDRAFT_60826 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCGRDRAFT_60826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ztr03041
]
MYCGRDRAFT_60826
Enzymes [BR:
ztr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MYCGRDRAFT_60826
Spliceosome [BR:
ztr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
MYCGRDRAFT_60826
Complex C
U5 SnRNP specific factors
MYCGRDRAFT_60826
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DDX23
ResIII
P-loop_SecA
PTA_PTB
HEM4
Motif
Other DBs
NCBI-GeneID:
13397898
NCBI-ProteinID:
XP_003850701
JGI:
Mycgr3_60826
UniProt:
F9XFS2
LinkDB
All DBs
Position
7:<1101850..>1104249
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AA seq
640 aa
AA seq
DB search
MRNGHAPAGPSVTRPSLSEKGFDTLPPPPPPQRSDREPDNAKLKKKNHNQSESEVAAELI
KQRYMGAEQNVSTFSAKNKRKRTTEKKFNFEWNAEEDTSPDYNPLYNVRSENNFFGRGKL
GGFADDANDTAAKQYARAIEERDPDAGSRRAAEMLEMEKRRREEGGRNGIDKHWSEKRLE
HMRERDWRIFKEDFNIATKGGAIPNPMRSWEESGLPKRLLDIVYDAGYVEPSAVQRAAIP
IALQSRDLIGVAVTGSGKTAAFLLPLLVYISNLPPLDEMTKNDGPYAIILAPTRELAQQI
ELEAKKFATPLGFTCVSLVGGHSIEEQSYNMRDGAEIIIATPGRLVDCIERRVLVLSQCC
YIIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSDIAEDPDAMAKHTYRQTMMYTATMP
PAVERIARKYLRRPATVTIGNVGEAVDTVEQRVEFVPGEDKRKKRLAEILHSREFAAPII
VFVNVKRACDSLARDIQKMGFQTVTLHGSKTQDQREAALASLRNGQTEVLVATDLAGRGI
DVPDVSLVVNFMMSHNIEAYTHRIGRTGRAGKEGVAITFLGNEDADVMYDLKQMIGKSKI
SRLPNELAKHEAAQQRSKGKRDRGGGAIEESGGFGGKGGW
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatggacatgctccggcaggtccctctgtaacgcgcccgtcgctgtcagagaaa
ggtttcgatacgctcccaccgccgccacctccgcaacgatcagatcgagaaccagacaac
gccaagctgaagaagaagaatcacaaccagagcgagtcggaagtcgcagcggagctgatc
aagcagcgttacatgggagctgaacagaacgtgtccactttctcagctaagaacaagcga
aagcgtacgacggagaagaagttcaactttgagtggaacgcggaggaggacaccagccca
gattacaacccgttgtacaacgttcgatcggaaaacaacttcttcggacgtggcaagctg
ggtggattcgcagatgatgccaacgacaccgctgcgaagcaatacgcacgggcgattgaa
gagcgcgatcctgacgccggcagcaggagagctgccgaaatgctggaaatggagaagcgg
cggagagaggagggaggtagaaacggcatcgacaagcattggagcgagaagagactcgag
cacatgcgtgaacgagactggcgtatcttcaaggaagactttaacattgccaccaaaggc
ggagccattccaaatccaatgcgaagctgggaagagtccggtctgcctaagagactgctg
gacatcgtctacgatgcgggctacgtggagccatctgctgttcaacgagctgcgattccc
atcgcacttcagtcgcgcgacctcataggtgtggccgtgaccggttcaggtaaaacagca
gctttcctcctccctctcctcgtctacatctccaacctcccgcctctcgacgaaatgacc
aagaacgacggtccctacgccatcattctcgcacccacccgcgaactcgcgcaacagatc
gagcttgaggcaaagaagttcgccacacctctcgggttcacctgtgtgtctctcgtcgga
ggacattccatcgaagaacagtcgtacaacatgcgcgacggcgctgagatcatcatcgcc
acgcccggtcgtcttgtcgactgtatcgagcgccgcgtcttggtcctctcccaatgttgc
tacatcatcatggatgaagccgaccgcatgatcgacctggggttcgaagaacccgtcaac
aagatcctcgacgcgctccccgtctccaacgagaaacccgactcagacatcgccgaggat
cccgacgccatggccaagcacacctaccgccagaccatgatgtacactgccaccatgcct
ccagccgtggaacgcatcgctcgcaaatatcttcggcgccccgccacagtaactatcgga
aatgtgggcgaagccgtcgacaccgtcgagcagcgcgtcgagtttgtccctggggaagac
aagcgcaagaaacgcctggctgagatcctgcactctcgcgagttcgctgcgccaatcatc
gtgttcgtcaacgtcaaacgcgcctgcgatagtctcgcgcgcgacattcagaaaatgggt
ttccagacagtcaccttacacggtagcaagacgcaagaccagcgtgaagcggcgctggct
tccctccgcaatgggcaaaccgaagtcctcgttgccacggacctggcgggtcgcggtatc
gacgtgccagacgtatcgctcgtcgtcaacttcatgatgtcgcacaatatcgaagcgtac
acgcatcgtattggacgtacgggtcgtgcgggtaaagaaggtgtggcgattacgttcttg
ggcaatgaggatgcggatgtcatgtatgatcttaagcagatgattgggaagagcaagatt
tcgaggctgccgaatgagttggctaagcatgaggcggcccagcagaggagtaagggcaag
agggataggggtggtggagcgattgaggaaagcggtggtttcggagggaagggtggctgg
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