Zymoseptoria tritici: MYCGRDRAFT_63016
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Entry
MYCGRDRAFT_63016 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K14327
regulator of nonsense transcripts 2
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03013
Nucleocytoplasmic transport
ztr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MYCGRDRAFT_63016
03015 mRNA surveillance pathway
MYCGRDRAFT_63016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_63016
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MYCGRDRAFT_63016
mRNA cycle factors
P-body specific factors
MYCGRDRAFT_63016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
13398000
NCBI-ProteinID:
XP_003849165
JGI:
Mycgr3_63016
UniProt:
F9XLM6
LinkDB
All DBs
Position
10:complement(565981..570604)
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AA seq
1147 aa
AA seq
DB search
MAAMERRRKRDLRELNTRAWNGEQDVFPVQSSLDSSMKKNTGLIKRLRTAITPANVATFL
QEIRSLSLHKYLTEIISACFEGLTKLKLAGDISAAVEIISALHQRFGPEEFTNYLGWYIG
RGLATPDKAQLKALPADVREREEKDRISRQRILLRVATELWLVGVLKSLEDISKPEDASK
GRDVPKGSDAAAKSKASAARSNTADPEPFPLEVLKDMLGQDREHVNLPLVVLFVKTFAWD
ILGSKPNKSETRQSVTENGAPTSNGHAESATTTENDDGASPDPPLTPPAMQERFKNILLR
YFEDVKAHIVRDQDRLSAQGRRNAEAYVKSGEVFEDRQNNHEKALKSQEKLVTSAQTLAE
VLGAEMPDLSEKDANSAGLESSIGLVRTGDYLRGQAEGAGIWEDEDERRFYENIVDLKDR
VPGILLEDGKKKKTDSEEQVGSKIDGSVESKEKAVENDDGSTAIANKTVGAQVDALLARL
HELTTKDQVDQFAIDFCFLNSKASRNRLIKSIEEIPKGRSDLLPLYARLVATLGRHLQDI
PQAMISYLDDEFRSLQRRKSKEFLGQVRMVNMRYIAELTKFGVVPEHVIFHCLKVCLDDF
SRMNIEIIANLLENCGRYLLRNPETSPRMVSFLETLQRKKGAQHLGQQERMLIENAMYYV
NPPERAAIQQKERTTLDLFVRKLVYVDLSKKSLDKIIKQVRKLHWEEAEVVDMLRKIFVK
PGKIRFGNIYLLAMMLAALYRFHTDFAITVLDELQERVTVGLEINDFKYNQRRIAEAKYL
GELYMYRVVDSSLIFDTLWKILNYGHKGGYAQPGEVCAMDLPDDYFRIRLACALLETCGH
CFEKGAAKKKLDFYLSFLQLYINVKDPLPMDMEFVVQDAYSLLRPQWKLVLNDLNEASNI
FAEACKQNYRDVASGKNAEPEEPEEEFEAGGDLSDDAQGDGEDAAAVDGDAANGKSDSDE
AAQGDDDMQADDSDEEERIVVTRPEDQRDPEADAEFDRELAKMMAESVESRKFDRKTLFD
VPLPMRRTAREAPAAAIQESPEAAPVPKPAAGTMKFALLSKKGNRQQTRSIDLPSDSNFA
IAMRSQQQAEKAEQQRIKNLVLNYDLTDDQQDGAFDTLHGAPRYDKSGNTRSKQRARKLQ
LGDIDWT
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggccgccatggagcggcgacgcaaacgcgatttgagggagctcaatactcgagcgtgg
aacggtgaacaagatgtcttcccggtccagtcgtcgctagactcgagcatgaagaagaac
acaggactgatcaaacgacttcgcaccgccatcacgcccgcaaatgttgccacttttctg
caagagattcgctccctttcgctacacaaatacttgaccgaaatcatatctgcttgcttt
gagggtttgacgaaactcaagcttgctggagacatcagcgctgcggtcgagattatcagc
gcacttcatcaacgctttggtccggaggagttcacaaattatctgggctggtatatcggt
cgtggcctcgctacgccggataaagctcagctcaaggctctgcctgccgacgtccgcgaa
cgggaggaaaaagaccgcatatctcgccagaggattcttttgagagtggccacggagctc
tggctggtcggcgtgttgaagagcttggaagacatatcaaagccggaggatgccagcaag
ggacgggacgttcccaaagggtcagatgcagctgcaaagagcaaggcaagcgcagctcgg
tcaaacaccgcggatccagagccatttcccttggaggtgttgaaggatatgctgggccaa
gatcgcgagcacgtcaatctgcctctggtggtgctgttcgtgaagacattcgcgtgggat
atccttggctcgaagcccaacaagtcggaaacacgccagtcagtcaccgagaatggcgct
cctacatccaacggtcacgccgagtctgcgaccacaactgagaacgatgatggagcatct
cccgatcccccattgacgccgccagccatgcaagagcgtttcaagaacatcctactgcgc
tactttgaggatgtcaaggcacacattgtccgcgaccaggaccgcttgtcggcccaaggc
agacgcaatgccgaagcatatgtcaagtctggagaagttttcgaggaccgacaaaacaat
cacgagaaagcactcaagtcgcaggagaaattggtgactagtgcgcagactttagctgag
gtgctcggagctgagatgcccgacctctccgagaaagatgccaactcggctggcttggag
agcagcataggacttgtcaggacaggcgactatcttcggggtcaagctgagggagcgggc
atttgggaagacgaggacgagcgacgtttttacgaaaacatagtcgatctgaaagaccgc
gtgcccggaattctcctcgaggatggcaagaagaagaagactgattctgaggagcaagta
ggctccaagattgatggatccgtggaatcgaaggagaaggctgtcgagaacgacgacggg
tcgactgcgatcgcgaacaagacggtcggagcacaggtcgatgctctgctcgccagactc
cacgaactcaccacaaaggatcaagtcgatcaattcgccattgatttctgcttcctcaac
tcgaaggcttctcgaaatcggctgatcaagtcgattgaagaaattcccaaaggcaggtcg
gatctcctgccactttatgctcgcttggtcgccactctcggccgccatttgcaggatatc
ccgcaagccatgatttcatacctcgacgatgaattccgcagtctgcagcgccgcaaatcc
aaggagttcctgggccaagtgcgaatggtgaacatgcggtatatcgcggagctgaccaag
ttcggtgttgtgccggagcatgtcattttccactgcctcaaggtctgtctggatgacttc
tcgcgcatgaatatcgagatcatcgccaatctgttggagaactgtggccgatatctgctt
cgcaatcccgagacctccccacgcatggtgtcgttcctcgaaactctgcaacgcaaaaaa
ggagctcagcatcttggacagcaggaacgcatgctcatcgaaaacgcaatgtactatgtc
aacccacccgagcgggccgcgatccaacaaaaggagcgcaccactctcgacctcttcgta
cgaaagcttgtctatgtcgacttgagcaagaaatcgctggataagatcatcaagcaggtt
cgcaagctgcactgggaggaggcagaggttgtggatatgctgcggaagatcttcgtcaag
cccgggaagatccgattcggcaacatttacttgctggcgatgatgctcgcggcgttgtat
cgctttcacacggactttgcaattactgttctggacgagttgcaggagcgcgtcacggtc
ggtctcgagatcaacgacttcaaatacaaccagcgccgcatcgcggaggccaagtatctc
ggcgagctgtacatgtatcgagtggtggactcctctctcattttcgacaccctatggaag
attctcaactatggtcacaaaggcggatatgcgcagcctggtgaagtctgcgcaatggat
cttcccgatgactactttcgcattcgtctggcatgtgcgctcctggagacctgtggccac
tgcttcgagaagggtgccgcaaagaagaagctcgacttttacctcagcttccttcagctg
tacatcaacgtcaaagatccgctgccaatggacatggagttcgtcgttcaggatgcatat
agcctgcttcgcccgcagtggaagctggtgctgaatgatctgaacgaggcgagcaatatt
ttcgccgaggcatgcaagcagaactatcgcgatgtagcatccggaaagaacgccgagccg
gaggagccagaagaggagtttgaggccggaggagatctatctgacgatgcacagggtgat
ggcgaggatgccgccgcggtcgatggcgatgcggccaacggcaaatctgacagcgatgag
gccgcgcaaggtgatgatgacatgcaagctgacgactctgacgaagaagaacgaattgtc
gtgacacgcccagaagatcaacgggaccccgaggctgatgcagaatttgatcgcgagctc
gccaagatgatggcggagagcgtggagtcccgcaagtttgaccgcaagacgctgttcgat
gtaccattgcccatgcgtcggactgcgcgagaggctcccgccgccgcgattcaagaaagc
cccgaggctgctccggtgccaaagcctgccgctggtacgatgaagtttgcccttctgagt
aagaaaggaaatcgtcagcagacacgatcgatcgaccttccgtccgactcgaactttgcc
atcgccatgcgatcccagcaacaagctgagaaggctgaacaacaacggatcaagaatctg
gtcttgaactacgacttgaccgatgaccagcaagatggcgccttcgacaccttgcacggt
gcaccacgatatgacaagtcgggtaatactcgtagcaaacagcgagcgagaaaacttcag
ttgggagacatcgattggacatga
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