Zymoseptoria tritici: MYCGRDRAFT_67423
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Entry
MYCGRDRAFT_67423 CDS
T02285
Name
(RefSeq) exosome complex exonuclease DIS3
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYCGRDRAFT_67423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_67423
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
MYCGRDRAFT_67423
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
Rrp44_S1
Rrp44_CSD1
OB_Dis3
PIN_4
CSD2
OB_HELZ2
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
13398567
NCBI-ProteinID:
XP_003856750
JGI:
Mycgr3_67423
UniProt:
F9X0R8
LinkDB
All DBs
Position
1:<5452139..>5455120
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AA seq
993 aa
AA seq
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MTSLKRSHAATTDTTTLSSKTYLRTLKSGKVQKIVRELYLRQDIPCSSQLCEACIGLAPA
GFDGKTEPTVLSATPAGTKQYPQGHYLIPDTNALLSAMDLFEAEGVLQDVVVLQTVLEEV
KNRSLPLYHRLIALTKNDGKRFYVFFNDFRLETYIQRDVGESINDRNDRAVRKACSWYAA
HLAEAVKARQSSRCPAIVMLTDDKANIQKSRAEGIIASTLHDYVSGLPEADKLLDMVASS
RDQRATRDERAKSIYPDYMSMSAMITGVKAGTLHQGIFNVSPYNYLEGSAQVPAFDRPLI
IQGRENSNRAVSGDIVVLEMLPKSQWKAPSSKVIEEDDLTKNDNAENEDDSSEALTTEKE
RKALQEEAKRAHGKVNEGKPQPTAKVVGIIKRNWRQYVGHIDKDSVKSGAKQSRSQQTVF
LVPMDKRIPKIRVRTRQAGELLGKRVLVTIDSWDRESRYPVGHFIRSLGELETKGAETEA
LLLEWDVQYRPFPKTVLDCLPAEGHDWKVPVDKADPGWKGRQDLRDLLVCSIDPPGCVDI
DDALHAVKLPNGNFQVGVHIADVSHFVKPNNAMDKEASLRGTTVYLVDKRIDMLPMLLGT
DLCSLKPYVERYAFSVLWEVNENADIINSTFTKSVIRSREAFSYERAQLRIDDVSQQDEL
TQGMRYLMMLSKKLRAKRMAAGALNLASPEVRIETESETSDPVDVKTKQLLDTNQLVEEF
MLLANISVAGKNYEAFPQTALLRRHGAPPKTNFEELSNQLKVKKNLEIRTDSSKALADSL
DTCVDPQNPFFNTLVRILATRCMMSAEYFCSGTQAYPEFRHYGLASEIYTHFTSPIRRYA
DLEAHRQLAAAIDYEPLDPSLQSKSKLEAVCKNINVRHRNAQMAGRASVEYYVGQALKGR
VLEEDGFVMRIFSNGFVVFVPRFGIEGLIRLKDMVGANGKEPESEFDGENYSLEIQVAEK
GKQVVELFQKVQVRISDEAEESTGKRKIKLQLA
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgacctctctcaagcggtcgcatgcggcgacaacggacacgacaacattgagctcaaag
acatatctgcggacgctcaaatctggcaaagtacaaaagattgtccgcgagctctacctg
cgacaagatattccgtgttcatcacagctctgcgaagcatgcataggtctcgcaccggca
ggctttgatggcaagaccgagccaacagtactgtctgctacgccagctggaacgaaacag
tacccccagggacattacctcatcccggacacgaatgcacttctctcggcgatggatctg
ttcgaagcggaaggcgtgctacaagacgttgtcgtgcttcaaacagttcttgaagaagtc
aagaatcgatcactcccgctttaccaccgtttgattgctttgacgaagaacgatggcaaa
cgcttctacgtcttcttcaacgactttagactagagacatacatacaacgagatgtcgga
gagtccatcaacgatcgcaatgatcgcgctgttcggaaggcgtgctcttggtatgccgcg
catctcgcagaagcagtcaaggctcgccaaagctctcgctgcccagcgatagtgatgctc
acagacgacaaagcaaacatccagaagtcacgagctgagggaattatcgcttccactctc
cacgactatgtctcaggactgccagaggctgacaagctgctggatatggtggcgtcaagc
cgcgatcaacgagcgacccgagacgagcgggccaagtcgatatatccggactacatgtct
atgtctgccatgatcactggagtcaaagctggcactcttcaccagggcatcttcaacgta
tcgccatacaactatttggaaggttcggcacaagtgcccgctttcgatcgcccactcatc
atccagggccgcgagaacagcaaccgtgcagtgtcgggtgacatcgtggtgcttgagatg
cttccgaaaagccagtggaaggcgccatcgagtaaggttattgaggaagatgatcttact
aagaatgacaatgccgaaaacgaggacgattcgagtgaagcactgacgacggagaaggag
cgcaaggctctgcaagaagaggcaaagcgtgcacatggcaaggtcaatgagggcaagcct
caaccgacagccaaagtcgtcggcatcatcaagcgcaactggcgtcagtatgtcggacac
atcgacaaggactcggtcaaatctggagccaagcagagcaggtcgcagcagactgtgttc
ctcgtgcccatggacaagcggatcccaaaaatcagagttcgcacacggcaggctggtgag
ctccttggcaagcgtgtattggtcacaatcgattcgtgggatcgagaatcgcgctatcct
gtcggacacttcattcgcagtctcggtgagctggaaacgaagggtgccgagacggaagct
ctcctcctagagtgggacgtgcaatatcgtccctttccaaagactgtcctggactgccta
ccagcggaaggtcatgactggaaggtgccggtcgacaaagcagacccaggctggaagggt
cgtcaagacttgagagatcttctcgtctgctccatcgaccccccaggctgtgtggatatt
gacgatgcgctgcatgctgtaaagctaccgaacgggaacttccaagtcggtgtccacatc
gccgatgtctctcacttcgttaagccaaacaacgccatggacaaggaggcatcacttcgc
ggcaccacggtatatctcgtagacaagcgaatcgacatgctgccgatgctactcggcacc
gacctctgctcgttgaagccctacgtcgagcgttacgccttcagtgtcctctgggaggtc
aacgagaacgccgacatcatcaactcaaccttcaccaaaagcgtcattcgctcccgcgaa
gcattctcctacgaacgcgcccaactccgcatcgacgacgtctcccaacaagacgaactg
acccaaggcatgcgctacctcatgatgctctccaagaaactccgcgccaaacgcatggcc
gcgggagccctcaacctcgccagccccgaagtccgcatcgaaaccgaaagcgagacctcc
gaccccgtcgacgtcaagaccaagcaactcctcgacaccaaccaactcgtcgaagaattc
atgttactcgccaacatctccgtcgccggcaaaaactacgaagcattccctcaaaccgcc
ctcctccgccgccacggcgccccacccaaaaccaacttcgaagaactcagcaaccaactc
aaagtcaaaaagaacctcgaaatccgcaccgactcctccaaagctctggccgacagttta
gatacctgcgtcgaccctcaaaacccgttcttcaacaccctcgtccgcatcctcgcgacc
cgctgcatgatgtccgccgagtacttctgctccggcacacaggcatatcccgaattccgc
cactacggtcttgcgtcggagatctacacgcacttcacatccccgatccgacggtacgcg
gacttggaagcccatcggcaactcgcggccgcgatcgactatgaacccctcgacccgagt
ttacagtcgaagagcaaactcgaagccgtgtgtaagaacatcaacgtccggcatcgcaac
gcacagatggcgggtcgggcgagtgtggagtattacgtcggacaagcgctcaagggacgg
gtgttggaggaagatggattcgtgatgcggattttcagtaatggattcgtggtgttcgtg
ccgcggtttgggatcgagggactgattcggttgaaagacatggtgggcgcgaatggaaag
gagccggagagtgaatttgatggggagaattattcgttggagattcaggttgcggagaag
gggaagcaggtcgttgagttgtttcaaaaggtgcaggtgaggattagtgatgaggcggag
gagagtacggggaagaggaagattaagctgcagttggcttga
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