Zymoseptoria tritici: MYCGRDRAFT_69118
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Entry
MYCGRDRAFT_69118 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K12830
splicing factor 3B subunit 3
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCGRDRAFT_69118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ztr03021
]
MYCGRDRAFT_69118
03041 Spliceosome [BR:
ztr03041
]
MYCGRDRAFT_69118
03036 Chromosome and associated proteins [BR:
ztr03036
]
MYCGRDRAFT_69118
Transcription machinery [BR:
ztr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
MYCGRDRAFT_69118
Spliceosome [BR:
ztr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
MYCGRDRAFT_69118
Complex B
MYCGRDRAFT_69118
Complex C
U2 SnRNP specific factors
MYCGRDRAFT_69118
Chromosome and associated proteins [BR:
ztr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
MYCGRDRAFT_69118
TFTC complex
MYCGRDRAFT_69118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
13400507
NCBI-ProteinID:
XP_003855262
JGI:
Mycgr3_69118
UniProt:
F9X4U4
LinkDB
All DBs
Position
2:complement(3531774..3535578)
Genome browser
AA seq
1218 aa
AA seq
DB search
MTQAFYALTVEAPSAPTHAVTCNAIPGLKATDQQIFEARGEHILLHRIVESADRTERSIV
TVCDQNVFGIVRGVAAFRIPGTATDQLVVSSDSGRVTMLTYDADKQNFKRVHLETYGKSG
IRRTIPGHYLASDSRGRCIMLASVEKNKVVYMLNRHADGNIIISSPHEANQMGSLCFGIC
ALDTGWDAPIFAALEVEYTEAEADPSGDAFKRREKQLVYYTVDMGLNHVVKSWTDTVDYT
ANMIIGVPGGQDGPSGVLVCAEDRIYYRHDKHPALSITIPRRNGPTEDSARKRTIVAYCL
HLAKTRHEFFFFLQTEDGDVFKLNMQMELDDQGRQTARPSAIVMKYYDTFPIARQMLLLK
KGYLYIATENGNSHLLHVDDLADDPDFEPHNTFTSDGVPSDPQDPTDPTYFQPRELTMTH
VACDVPGLHPLIKTKVDNLTSEDAPQIYAIQGTGNKSQFKTIRHGLNVEEIINNSMGNVP
YDNIWTFKHRSTDEFHRYLLLSSSYGDLTIACSIGDSVEQIENSSFLENRATVHAQQMGD
ATLVQVHARGIRSILESGALNEWPTPAHRTVVVASANERQLLLALSSAELAFFFMQDDGI
LVQLEEMPEMSGKVTALSVGRTPKGRQQAKYAVVGCDDCTIRVLSIELDSPLEPRSVQAL
SAVPTSLEVVEMHDPSSNSYVNVVHIGLQSGLYLRAVIDETTGELGDVRTKFLGTRPPRL
CPVEINDQECVLACSSRPWLGYNHPQSQQYTVTPLIAEPIEAARSFISPDLVGLCAIQGS
SLLIMQVPSIEGRLSSSTIDLNYTPRAMDRNPLYPIWYTAQADGNTLSKAMRDQLRGKSI
DDDEEATALEKHLGVSRGTGHWASCIQAIDPITQKAVTHTIELGENEAALCIACVPFTSR
QDEVFLAVGTGQHMSPGTSQPSTGFVHIYRLLEEGTKLEFVHRTQFDSPIYALCKFNGRL
ALGVGNELFIYDMGMKHLLRKARGTAVPNLITHITSVGNRLICADVSESVTYVVYKPAFN
RLIPFVDDTIQRWTTATALVDYETVAGADKFGNLWVVRCPEATSTEADEDGAGGYIMNER
SYLGGAPYRLELRSHFFANDIPTSLQRTSLVAGGAEVIFWSGLQGTLGMLVPFVSREDVE
FFTALESQMRQEDPPLAGRDHLMYRSYYVPVKGVIDGDLCERYLGLREDVKGKIAAEVDR
SVKEVEKKVQEMRGRVAF
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggcattctatgccctcactgtagaagctccctccgctccaacccacgctgtc
acctgcaatgcgatccccggactcaaagcgaccgatcagcaaatcttcgaggcacgcggc
gagcacattcttctccaccggatcgtggaaagcgccgacagaaccgagcgtagcattgtc
acagtatgcgatcagaatgtgtttgggatcgtgcgcggtgtggccgctttccgtattcct
ggaactgctactgatcaattggtcgtttcatccgactctggccgtgtaacaatgctcacg
tacgatgccgacaagcaaaatttcaagcgagtccacctcgagacatatggcaaatctgga
atccgtcgaacgattcctggacactacctggcgagcgacagtcgagggagatgtatcatg
ttggcaagcgtggagaagaacaaggtggtctacatgttgaatcgccatgccgacggcaac
attatcatatcgagtcctcacgaggccaaccagatgggcagtctatgtttcggaatatgc
gcgctggacactggctgggacgctccgatctttgcggcattggaagtcgagtacacagaa
gcggaggctgatccgagcggagatgcgttcaagaggagggaaaagcaattggtgtactat
acggtggacatggggctgaatcatgtggtcaagagctggaccgacacagtggactacaca
gcgaatatgattattggtgtacctggaggacaagacggaccatcaggagtgctggtctgc
gcggaggatcgcatctactatcgccacgacaaacatcctgctctctcgattacgatacct
cgaaggaacggcccaaccgaggactcggcgcggaagaggacgattgtcgcatactgcttg
cacctggccaagacgagacacgaattcttctttttcttgcagacagaagacggcgatgtc
tttaagctgaacatgcaaatggagctggacgaccaaggccgccagaccgcgagaccttca
gcaatcgtcatgaaatactacgacacatttccgatcgcccgccaaatgcttctcttgaag
aagggctacctctacattgccactgagaacggcaacagccatctccttcacgtcgacgat
ttggccgatgatccagactttgaaccccacaacacctttacctccgacggtgttccatcc
gatccacaagatcccacagatccgacatacttccagccgagagaactgacgatgacccac
gtcgcctgcgacgttccagggttacacccactgatcaagacgaaagtggacaacctcacc
agtgaagatgctccgcaaatctacgcaatccaaggcacaggcaataagagtcagttcaag
acgatccgtcacggtctgaacgtggaggagatcatcaacaacagcatgggcaatgtgcct
tatgacaacatctggacattcaaacatcgatccacggatgaattccatcgatacctcctc
ctcagcagtagctatggcgatctcacaatcgcatgttccatcggcgattcggtcgagcag
atcgagaactccagctttctggaaaaccgcgcaacagtccatgcgcaacaaatgggcgac
gcgacactcgttcaagtacacgctcgcggtattcgaagcatcctggaatctggcgcactc
aacgagtggccaacacccgcacatcgcactgtggtcgtcgcatcagcaaacgagcgccaa
ctactcctggcattgagctctgccgagcttgccttcttctttatgcaagacgatggcatc
cttgtgcagcttgaggagatgccagaaatgagtggcaaggtgactgcgctgtctgtcggc
cggacaccgaagggtcgacagcaagcaaagtatgcagtcgtggggtgtgatgactgcaca
attcgcgtcctcagcatcgagctggattcgccgttagagccacgcagtgtgcaagctctt
tcggccgttccaacatcgcttgaggtggtcgagatgcatgatccttcatcgaattcatac
gtcaatgtggtgcacatcggtctccagtccggtctgtacctccgagcagtcatcgacgag
acaactggcgagctcggtgatgtacggacgaaattcttgggcactcggcctccccggtta
tgtcccgtcgagatcaatgaccaagagtgcgtcctcgcatgctcaagccgaccatggctt
ggttacaatcacccgcagagccagcagtacacagtcacgcctctcattgctgagccaatc
gaagcggcaagatcattcatcagccctgatctggtcggcctctgtgctattcaaggctct
tccctcctgatcatgcaagtaccctccatcgaaggacggctctcatcctccacaatcgac
ctcaactacacacctcgcgccatggatcgcaaccctctctaccccatctggtatacagca
caagcggatggcaacacattatcaaaagccatgcgagaccagctacgaggcaagtcaata
gacgatgacgaagaggccaccgcattggagaaacacctcggtgtgtcccggggcaccggc
cactgggcgtcttgcatacaagcaatcgaccctatcacacaaaaagcagtcacccacacc
atcgagcttggcgaaaacgaggccgcactctgcatcgcctgcgtccccttcacttcccgt
caagacgaagtattcctcgccgtcggtacaggccaacacatgtctcccggcacctcccaa
ccctccaccggcttcgtccacatctaccgcctcctcgaagaaggcaccaaactcgaattc
gtccaccgcacccaattcgatagccccatctacgccctttgcaaattcaacggccgcctc
gccctcggcgttggcaacgaactcttcatctacgacatgggcatgaaacatctcctccgc
aaagcccgcggcaccgctgttcccaacctcatcacccacatcacctccgtcggcaaccgc
ctcatctgcgccgacgtctccgaaagcgtaacatacgtcgtgtacaaacctgccttcaac
cgtctcatccctttcgtcgacgacacgatccaacgctggactaccgccaccgcccttgtt
gactacgaaaccgttgcgggcgcggacaagttcggcaatctgtgggtcgtgcgctgtccc
gaagcgacgtccactgaggccgacgaagatggcgcaggcgggtacatcatgaatgaacgc
tcctacctcggtggtgcgccgtaccgcctcgaactgaggtctcatttcttcgccaacgac
atccccacctccctgcaacgcacctccctcgtcgcgggtggagctgaggtcatcttctgg
agtggactacaaggaacgctgggtatgctcgtaccctttgtctcaagggaggacgtggag
ttcttcacggcattggagtcgcagatgaggcaagaggatccgccgcttgcgggcagggac
catttgatgtatcgaagctattacgtgccggtgaaaggtgtgattgatggggacctttgc
gagagataccttgggttgagggaggatgtcaaggggaagattgctgcggaggtggatcgc
agtgtgaaggaggtcgagaagaaggtgcaggagatgagggggagggtggctttttaa
DBGET
integrated database retrieval system