Zymoseptoria tritici: MYCGRDRAFT_71536
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Entry
MYCGRDRAFT_71536 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCGRDRAFT_71536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ztr03041
]
MYCGRDRAFT_71536
Enzymes [BR:
ztr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MYCGRDRAFT_71536
Spliceosome [BR:
ztr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
MYCGRDRAFT_71536
Complex C
U5 SnRNP specific factors
MYCGRDRAFT_71536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_PWI
ResIII
BRR2_plug
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
13399774
NCBI-ProteinID:
XP_003853127
JGI:
Mycgr3_71536
UniProt:
F9X8J5
LinkDB
All DBs
Position
4:2403438..2410046
Genome browser
AA seq
2202 aa
AA seq
DB search
MADSKKGAGGADNNLGQYKYAAMSNLVLQADRRFVSRRGDETTGDPESLAGRINLGEMGS
RTAREKAPVSAATQEQARKRKRTEPVQSSRAAGILSQQDMNIEGLRYRPRTAATKDVYDL
ISTNVAQKMGGDYGLAVTASATDSVLEYLKDDSLKDFDKKKEIDDILGITSSSKEFNQLV
NLGKKITDYDAQDDDEEMGEGLQDEADLDEQQGVAVDFGSEDEDEDAGRTFEVREEDEES
EDDLAVGAEEEAEDGAGPPPDVEGEEGEEDDGMVIENRPRRSAKESKDPNNVPAHEIDAY
WLQRQIGQIYEDAHIQTEKTREAETIMSAKDDEGEEKPLREVENDLMELFDYEHHELVGK
LVKNRDKIIWVTRWRRVAEDEEARVALEKDMVNAGHATILKELRGRDDAPAKGAPKITVK
LDPMDLDAKLPVKDEDDVKKEGIVGGLQPRKTLNLEDLKFDQGNHLMTNQNVKLPQGSTK
RTFKGYEEIHVPAPKRRPNPNEQSLIPTSSLPTWAQAGFGSSKSLNRIQTECYKSAFEDD
GNMLICAPTGSGKTNVAMLTMLREIGKHRDPDTGAFDLAAFKIIYIAPLKALVQEQVGNF
GKRLEAYGITVSELTGDRQLTKEQIANTNVIVTTPEKWDVITRKATDTSYTNLVRLICID
EIHLLHDDRGPVLESIVSRTIRRVEQTGDPVRIVGLSATLPNYHDVATFLRVDKKDLYHF
DGTFRPCPLKQEFVGVTEKKAIKQLKTMNDVCYTKVLEQVGQNKNQMLIFVHSRKETAKT
AKYIRDKALENDTIGQILRTDAASREILREEAEAAQNAELKDVLPYGFGIHHAGMSRADR
TAVEDLFSDGAIQVLVCTATLAWGVNLPAHTVIIKGTQIYSPEKGSWVELSPQDVLQMLG
RAGRPQYDTYGEGIIITTQAEIQYYLSLLNQQLPIESQFVSRLADNLNAEIVLGNIRTRD
DGVEWLGYTYLFVRMLRSPAIYQVGADYMEDETLEQKRVDLIHSAAAVLEKASLVKYDKK
TGRLQSTDLGRIASHYYITHNSMLTYNMHIQPSVSPIELFRVFALSDEFKYIPVRQDEKL
EMAKLLGRVPIPVKETIDEPQCKINVLLQAYVSRLKLEGLALMADLVYVTQSAGRILRAM
FEIALKKGWSSVAKDALDLCKMAEKRMWPTMTPLRQFPDCSVDIIKKAERMDVPWSSYFD
LDPPRMGELLGMPKQGRQVCNLVAKFPRLDIQAQAQPITRSMLRVELTITPKFEWDDSIH
GRAESFWIIVEDCDGEDILFHDQFILRKDYAISEMNEHIVGFTVPITEPMPPNYFISVIS
DRWMHAETKLTLSFQKLVLPEKFPPHTPLLDMQPLPVQALKREDFVGLYPDWPQFNKIQT
QTFNALFQSDDNVFVGAPTGAGKTVCAEFALLRHFAKANAGKAVYVAPFQQQIDARQKIW
QARLGPLAGGKEIVKLTGETTADLKLLEKGHLILATPVQWDMMSRQWQRRKNVQNVSLII
ADDLHMLGGHGGYIYEAVMSRSQAIKAQLENDLRTIGLSVSLSNARDVGEWIGCSKHTIF
NFSPNSRPISLNLHLQTFNIPHFPSLMLAMVKPAYQAIVQYAPDKPSIVFVPSRKQVRGT
ALDLLAACTAEDDEDRFLQTDAEQLAPILARVKERSLAESLSHGIAYFHEGMNDSDKRIS
ESLYMQGAAQVMLVSRDCCWEIQSVAHLVIVMGTQFFEGREHRYIDYPISDILQMFGKAG
RPSTDKDCRGVLMCPDVKRNYYKKFLGEALPIESQLQSYLHDAFVTEISTKTIESTQDAV
DWTTYTYLYRRLLANPSFYGLTDTSHEGLSAYLSEQVESTLKDLSDAKIIELDEDEDTIA
PLNAAMIAAYYNISFITMQTLLLSLRRGTKLKGILEIVTAATEFEDIQIRRHEESVLQLI
YDRIPAKLSDLNLESPHTKAFILLQAHFSRMQLPTDLAKDQEVILRKVLNLLSACVDVLS
SEGHLNAMNAMEMSQMVVQAMWDRDSPLKQIPHFEDRVVEVCSQFKIKDVFEFQDAMDPD
ENPDHEKLMKGLGFSNTQLADAAKFINERYPNVELEFELEDAENVVSGSPSTLNVSITRQ
LEEDEEPNLAVHAPFYPAEKTENWWLVVGEEKTKNLLAIKRVTVARELKTKLEIVVPTAG
VHELTLYLMSDSYVGVDQAPTFEVDAAEGEEEEEDEDEEMEG
NT seq
6609 nt
NT seq
+upstream
nt +downstream
nt
atggcggactccaaaaagggcgctggcggcgccgacaacaatctcggccaatacaaatat
gcggccatgtcaaatttggtcctccaggcggatcgaagatttgtgagccgtcgcggcgat
gaaacgacgggagatccagagtcgctggctggcagaataaatctgggagaaatgggatca
cggacagcacgtgaaaaggcacctgtgtccgcggcgacacaagaacaagcccggaagagg
aaacgaacagaaccggtgcagagctcgcgcgcagctggtatcctcagccaacaggatatg
aacattgaaggactgcgatatcgcccccgaaccgctgcgaccaaggacgtgtacgatttg
atctcgacgaatgtggcgcagaagatgggtggcgattatggtcttgcagtcacggcttct
gcgacggattccgtgttggagtacctgaaggatgatagtctgaaggactttgacaaaaag
aaggagattgacgatatcttgggaatcacaagttcgagcaaggagttcaatcagctggtg
aacttgggcaagaagatcacggattatgatgcgcaggacgatgatgaagaaatgggcgag
ggtctgcaagatgaagcggatctggatgaacaacagggcgtagccgtcgactttggatcc
gaggatgaggacgaagatgctgggagaacattcgaagtcagggaagaggacgaggagtca
gaagacgacttggccgtcggagctgaagaagaggcagaagacggtgctggtcctccacct
gatgtcgagggcgaggaaggcgaggaagatgatggaatggtgattgagaatcggcctcgt
cggagtgcgaaggaaagcaaggatccgaataacgtcccggcacacgaaatcgatgcatac
tggttacagcgacaaatcggccaaatatacgaggacgctcacattcagaccgagaagaca
cgagaggccgaaacgatcatgtcggcgaaggatgacgagggagaagagaagcctttgcga
gaagttgagaacgacctcatggaactcttcgattacgagcatcatgagttggtgggcaag
ctggtcaagaatagagataagatcatttgggtcactcgatggcgaagggtggccgaagac
gaggaggctcgcgtggctttggagaaggatatggtcaatgccggacatgccaccattctc
aaggagctgcgtggccgtgacgatgcgcctgcaaagggtgcgccgaaaatcaccgtcaag
ctagacccaatggatctggacgccaagctgccagtcaaggacgaggacgatgtcaagaag
gaaggcattgtcggtggtctgcagcctcggaagacgctcaatcttgaagacttgaagttc
gaccaaggcaaccatttgatgaccaaccagaatgtcaagctaccgcaaggatcgacgaag
aggaccttcaagggctacgaggagattcacgtgcctgcgccaaagcgaaggccgaacccg
aacgaacagtccctaatcccaacgtcaagtctaccgacctgggcacaagcaggcttcggc
agctccaagtccctcaaccgcatccagacagagtgttacaaatctgcattcgaagatgac
ggcaacatgctgatctgtgctccgacgggttcgggtaagacgaacgtcgccatgttgact
atgcttcgagagatcggcaagcatcgcgaccctgacactggagctttcgacctcgctgct
tttaagatcatctacattgctcccttgaaggcgctggtacaagagcaagttggcaacttc
ggcaagcggttggaggcttacgggattactgtttctgagcttactggagatcggcagctc
accaaggaacaaatcgcaaacaccaatgtgattgtcactacgcctgagaagtgggatgtc
atcactcgaaaggccaccgacacgagctacacgaacctcgtccgactgatctgcattgat
gagatccatcttctgcacgacgatcgaggccccgtgcttgagagcattgtttctcgaaca
attcgacgtgttgagcagactggcgatcctgtgcgaattgtaggtctgtccgcaaccctg
cccaactaccatgatgttgccactttcctgcgagtcgacaagaaagacctctatcacttc
gacggcacattccgaccttgtccattgaagcaagagttcgtcggcgtcacggagaagaaa
gcgatcaagcagctcaagacgatgaacgatgtctgctacacaaaagtgcttgagcaggtc
ggccagaacaagaatcagatgctcatattcgtccattcacggaaggagaccgcaaagact
gccaagtacatccgtgacaaggcgctcgagaatgatactatcggacagattctgcgaaca
gacgctgccagccgtgagattctgcgcgaggaagcggaagctgcgcagaatgcagagctc
aaggacgttctgccgtacgggtttggtattcaccacgccggtatgagccgagcggacaga
actgctgtcgaagatctgttctccgatggcgcgattcaagtcttggtttgcacagcgacc
ctcgcgtggggtgtcaacttgcctgcgcatactgtcatcatcaagggcacgcagatctac
tcgcctgagaagggttcctgggtggagcttagcccgcaagatgtgctgcaaatgcttggt
cgtgcgggtcgtcctcagtacgacacgtatggtgaaggtatcatcatcacgacacaggct
gaaattcagtactatctgtctttgctgaaccagcaactgccgattgagtcgcaattcgtc
tcgagactggcggacaatctcaatgccgaaatcgtgctgggcaacatcaggactcgtgac
gacggtgtggagtggctcggctacacatacctcttcgtccgcatgctacgatcccccgcc
atctaccaagttggcgccgactacatggaagacgagacactcgagcaaaagcgagtcgat
ctgatccactcagctgcggcagtactggagaaggccagcctggtcaaatacgacaagaag
acaggtcgtctgcagtcgactgatcttggccgaatcgccagtcactactacatcacgcac
aacagtatgctgacatacaacatgcacatccaaccttccgtcagcccgatcgagcttttc
cgagtctttgcgctcagcgacgagttcaagtacattccagtgcggcaagacgagaagctc
gagatggccaagctcctgggtcgggtaccaatcccagtcaaggagacgatcgacgagccg
caatgcaagatcaacgtcttgctgcaagcatacgtgagcagactgaagctcgagggtctt
gcattgatggccgatctcgtctacgtcacgcagtccgctggtcgtatccttcgtgcgatg
ttcgaaattgcattgaagaagggctggtcatccgttgccaaggatgctttggatttgtgc
aagatggcggagaagaggatgtggcccaccatgacgccgctgagacaattccctgactgc
tcggtcgatatcatcaagaaggccgagcgtatggatgtgccgtggtcgagctatttcgat
ctcgacccgccacggatgggtgaattgctgggcatgcctaagcaaggtcgacaggtctgc
aacctggttgcaaagttccccagactggacatccaggcacaagcgcagcctattactcgg
agtatgcttcgggtcgagctcaccatcactcccaagttcgagtgggatgattccattcat
ggacgtgcggaaagcttctggatcattgtcgaggattgcgatggtgaagacatcctattt
catgatcaattcatcctccgcaaagactacgccatctccgagatgaatgagcacatcgtc
ggatttacagtacccatcaccgagcccatgcctccgaactactttatctctgtcatcagc
gatcgctggatgcacgccgagaccaagctcacgctgtccttccagaagttggtcttgccg
gagaagttcccgcctcacactccgcttctggacatgcagcctctgcctgttcaggccttg
aagagggaggacttcgtgggtctgtacccggactggccgcagttcaacaaaattcagacg
cagacgttcaatgcactgttccaatctgatgacaatgtctttgttggagcaccgactggc
gccggaaagactgtctgcgcggaattcgccctgcttcggcacttcgcaaaagcgaatgca
ggcaaggctgtgtatgttgcacccttccagcaacaaattgatgcgaggcagaagatctgg
caggcgaggctaggcccattagcaggtggcaaggagatcgtcaagctaactggcgagacg
actgctgatctgaagctcctagagaagggtcatctcatcctcgccacgcctgtgcagtgg
gatatgatgtctcgacagtggcagcgaaggaagaatgttcagaatgtcagcttgattatt
gccgacgatttgcacatgctcggcggccatggtggctacatctatgaggctgtcatgtct
cgatcccaagccatcaaagctcagcttgagaacgacctgcgaaccatcggtctgagcgtt
tccctctccaacgcgcgagatgttggcgaatggatcggctgcagcaagcacaccatcttc
aacttcagccccaacagccgaccaatctccctcaacctgcatctgcagacctttaacatt
ccccatttcccctcgctcatgttggccatggtcaagcctgcttaccaggctatcgtccag
tacgctccagacaagccgtcaatcgttttcgttccaagccgaaagcaggttcgcggcacc
gcactggatctgcttgctgcttgcactgccgaggatgacgaggatcgattcttgcagacc
gacgctgagcagttggcacccatcctggcgagggtgaaggagcggtcactcgctgagtcg
ctttcgcatggtattgcttacttccatgagggcatgaacgactccgacaagcgcatctcc
gagtcgctgtacatgcagggcgccgcacaggtcatgctcgtgtcgcgagactgctgctgg
gagatccaaagcgtcgctcatcttgtcattgtcatgggcacgcaattcttcgagggtcgt
gagcatcgctacatcgactaccccatcagcgatatcttgcagatgttcggcaaggctggc
cgaccctcgaccgacaaggactgcagaggtgtgctgatgtgtcccgatgtcaagcgcaat
tactacaagaagttcttgggtgaggcgctgccgattgagagccagctgcagtcataccta
cacgatgcgtttgtcactgagatcagcacgaagacgatcgagtcgacgcaagatgctgtg
gactggacgacttacacttatctctacaggagactgttggcgaatcccagcttttacggg
cttacagatacctctcacgagggtctcagcgcgtacctgtctgagcaagtggagagcacg
ttgaaggatctgtctgatgcaaagatcatcgaactggacgaagacgaagataccatcgcc
ccactcaatgctgccatgatcgcagcatactacaacatctccttcatcacgatgcagacg
ctcctgctctctctccgccgcggcaccaagctcaagggaatccttgaaatcgtcacagct
gccaccgaattcgaagacatccagatccgccgtcatgaagagtctgtcttgcaactcatc
tacgatcgcatcccagccaagctctccgacctcaaccttgagtcaccacacaccaaggca
ttcatcctgctgcaagcccacttctcccgcatgcaactccctaccgatctcgccaaagac
caagaagtcatcctccgcaaggtgctcaacctcctcagcgcttgcgtcgacgtgctctcc
tccgaaggccacctcaacgccatgaacgccatggaaatgagccaaatggtcgtacaagcc
atgtgggaccgcgactcgccactcaagcagatccctcacttcgaagaccgcgtcgtggaa
gtctgctcacagttcaagatcaaagacgtctttgaattccaagacgctatggatccggac
gagaaccccgaccacgagaaattgatgaagggtctcggtttcagcaacactcaactcgcc
gacgcggctaagttcatcaacgagcggtacccgaacgtcgagctggagttcgagcttgag
gacgcggagaacgtcgtctctggttctccgagcacgcttaatgtctccatcactcgccaa
ttggaagaggacgaagagccgaaccttgctgtccacgcgccgttctatcctgcggaaaag
acggagaactggtggttggtggttggagaggagaagacgaagaatctgctcgcgatcaag
agggttactgttgcgagggagttgaagacgaagttggaaattgtggtcccgactgcgggg
gtgcatgagttgacgttgtatttgatgagtgattcgtatgtgggtgtggatcaggcgccg
acttttgaggttgatgctgcggagggcgaggaggaggaagaagatgaggacgaggagatg
gaggggtag
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integrated database retrieval system
