Zymoseptoria tritici: MYCGRDRAFT_72776
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Entry
MYCGRDRAFT_72776 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K12855
pre-mRNA-processing factor 6
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCGRDRAFT_72776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ztr03041
]
MYCGRDRAFT_72776
Spliceosome [BR:
ztr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
MYCGRDRAFT_72776
Complex C
U5 SnRNP specific factors
MYCGRDRAFT_72776
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
TPR_16
HAT_Syf1_CNRKL1_N
Suf
TPR_2
TPR_8
ARM_TT21_2nd
TPR_15
TPR_CcmH_CycH
ARM_TT21
CENP-K
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
13393742
NCBI-ProteinID:
XP_003851965
JGI:
Mycgr3_72776
UniProt:
F9XEF6
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All DBs
Position
6:complement(346604..349431)
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AA seq
936 aa
AA seq
DB search
MSGRKDFLSQQAPENYVAGLGRGATGFTTRSDLGPAREGPSEEQIKEALAKRAAALGNAP
PTAYGVKKKDGDDAEVEEQFRDAENEEGLFATGNYDRDDDEADRIYQDVDERMSKRRKIS
REERERQEREEFERKNPKIQQQFADLKRALGTITDEDWASIPEVGDLTGKNRRNKQNMRQ
RFYAVPDSVLAGARDSTQLGTEIQDDGMATDAPGGSNEQQADGTMTNFAAVGAARDKVLK
VRLDQAAQSQGGTETSGTSTAIDPKGYLTSLTKSEQKAGEIQVGDIKRARVLLESVIKTN
PRHGPGWIAAARLEEYAGKIVAARNVIRRGCEMCPKSEDVWLESMRLNDNSNAKIIAAKA
IEHNNRSVNLWIEASKLETIPTSKKRVLRKALDHIPQSVAIWREAVNLEDDPSDAKLLLA
KATEIIPLSVELWLALARLETPEQAQVVLNKARKAIPSSFEIWVAAARLQEQTGNEAMVF
KVMNRAVKALARESAMLKREEWIAQAELCEDEGALVTCRAIIQETIGWGLDKDDDRKKLW
LDDAKSSVNRGQYETARAIYAVAMKEFYHRKSVWLSAADLERSHGSKENLWKILESAVNS
IPNSSELWMQFAREKWLAGDVEGARRVLGEAFSKNPDNEDIYLAAVKLEADNGQSDQARR
LLAQAREEARTDRVFIRSVAFERQINDKDRALELANEGLGIFPKADKLWMMKGQIYESKN
MLPQAREAYSAGTRNCPKSVPLWLLASRLEEKMGVTVKARSILDRARLAVPKNPQLWTET
IRLELRAKNVPAANQKLAQALQECPKSGLIWSERIWNLEARTQRKPRILEAIQKAENDPI
LFITAARIFWSERKLDKADSWFQKAVLLDPDYGDTWAWWYKFLLQHGTDEKRAEVVEKCV
QNEPKHGEYWQGVRKAPENAGKGIEEVLKIVARGLE
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtcgcaaggactttctctcgcagcaggcgcctgagaattatgttgccggtctc
ggacgtggcgcgacaggcttcacgacacgatcggatctcggacctgccagagaaggtccc
agcgaagagcagatcaaggaagcgctcgcgaaacgagcagctgctctaggaaatgcccca
cccacagcatacggagtcaagaagaaggacggcgatgacgcggaggttgaagagcagttc
cgcgacgccgaaaacgaggaaggcctattcgcaacaggaaactacgatcgagacgatgat
gaggcggatcgcatataccaggatgtggacgagcggatgagcaagcgaaggaagatctca
agagaagagcgagagcggcaagaaagggaggagtttgagaggaagaatccgaagattcaa
cagcagtttgcggatttgaaaagagctttgggcacaattaccgatgaggactgggcaagc
ataccagaagtgggtgatctgacgggaaagaatcgaaggaataagcagaacatgcgtcag
aggttctatgcagtaccggacagcgttttggcaggtgcaagagacagtacgcagctcggg
acagagattcaggacgatggcatggcgactgatgcgcctggcggttcaaacgagcagcag
gcggacggaaccatgaccaacttcgcggcagtcggcgctgcgagagacaaagtgttgaag
gtgcgattggatcaggctgctcagtcgcagggcggcacggagaccagcggtacaagcacg
gccatcgatcccaaaggctacctcacaagtctgaccaagtctgagcagaaggctggcgag
atccaagtgggagacatcaagcgtgcgcgagtgctgttggaatctgtgatcaagacgaat
cctcgccatggaccaggttggattgccgcggcacggctggaagaatatgctggaaagatt
gtggctgctagaaatgttatccggcgaggctgcgaaatgtgcccgaagagcgaagacgtt
tggctggaaagcatgcgattgaacgacaactcgaatgcgaagatcattgccgcaaaggcg
attgagcacaacaaccgttccgtgaatttgtggattgaggcatcaaagctggagaccatt
cccacatccaagaagcgtgtactacggaaagctttggatcacatcccacagtccgtcgcg
atttggagagaagctgtgaacttagaggacgatccatccgatgcgaagcttctacttgca
aaagcgactgaaatcattcctctatcggtagagctatggctggccttggcacgactggag
acacccgaacaagctcaagttgtactcaataaagctcgtaaagctattccctcgagcttc
gaaatctgggtggctgctgcacgtctccaagagcagactggcaacgaagcgatggtgttc
aaggtcatgaatcgtgctgtgaaagctcttgcgcgcgaatcagctatgttgaagcgcgaa
gagtggatcgcgcaggctgagctgtgtgaggatgaaggtgcgctcgtcacctgccgggct
atcatccaggagaccatcgggtggggacttgacaaagatgacgaccgcaagaagctgtgg
ttagacgatgccaagtcctctgtcaaccgtggacagtacgagacggcgagggccatctac
gccgttgcgatgaaggagttttaccacagaaagagtgtttggctttcggccgcagacttg
gagaggagccatggaagtaaagagaatctatggaagattctcgagagtgcagtcaattcg
attcccaattccagcgaattgtggatgcagttcgcgagagaaaagtggttggctggagac
gtggagggcgctcgacgtgtgctcggagaagccttctcgaagaaccccgacaacgaagac
atctaccttgccgccgtcaagctggaagctgacaatggccagtcagatcaggcacgacgc
ctgctggcacaggcccgcgaagaagctcgcacagatcgagtctttattcgcagtgtggct
ttcgagcgccagatcaacgacaaagatcgtgcgttggagcttgcaaatgaaggtctgggc
atattccccaaggctgataagctgtggatgatgaagggccagatctacgagtcgaagaac
atgcttccccaagctcgcgaggcatacagcgctggtacacgcaattgtcctaagagcgtg
cctctgtggctccttgccagccgtctggaggagaagatgggcgtgaccgtcaaggcccgc
tcaattctcgatcgagcccgcctggccgttccaaagaaccctcagctctggaccgagacc
attcgcctcgaacttcgcgccaagaacgtccccgccgccaaccaaaaactcgcccaagcg
ctccaagaatgtccgaaatctggtctcatatggagcgaacgtatttggaatctggaagcc
cgcacgcagcgcaaacctcgcattctcgaagcaattcagaaagcagaaaacgaccccatc
ctcttcatcaccgctgcgcgcatcttctggagcgagcgcaaactcgacaaagcggacagt
tggttccaaaaagctgtgctgctggatccggactacggcgatacgtgggcttggtggtac
aagttcttgctgcagcacgggacggatgagaagagggcggaggtggtggaaaagtgtgtg
cagaatgagccgaagcatggagagtactggcagggtgtgaggaaggcgcctgagaatgcc
gggaaggggattgaggaagtgttgaagattgtggctagaggcttggagtga
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