Zymoseptoria tritici: MYCGRDRAFT_74526
Help
Entry
MYCGRDRAFT_74526 CDS
T02285
Name
(RefSeq) ATP-dependent RNA helicase
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03013
Nucleocytoplasmic transport
ztr03015
mRNA surveillance pathway
ztr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCGRDRAFT_74526
09122 Translation
03013 Nucleocytoplasmic transport
MYCGRDRAFT_74526
03015 mRNA surveillance pathway
MYCGRDRAFT_74526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_74526
03041 Spliceosome [BR:
ztr03041
]
MYCGRDRAFT_74526
03009 Ribosome biogenesis [BR:
ztr03009
]
MYCGRDRAFT_74526
03012 Translation factors [BR:
ztr03012
]
MYCGRDRAFT_74526
Enzymes [BR:
ztr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MYCGRDRAFT_74526
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MYCGRDRAFT_74526
mRNA cycle factors
Stress granule specific factors
MYCGRDRAFT_74526
Spliceosome [BR:
ztr03041
]
Complex C
Other components
EJC/TREX
MYCGRDRAFT_74526
Ribosome biogenesis [BR:
ztr03009
]
Eukaryotic type
90S particles
Helicases
MYCGRDRAFT_74526
Translation factors [BR:
ztr03012
]
Eukaryotic type
Initiation factors
eIF-4
MYCGRDRAFT_74526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
Cas3-like_C_2
TniB
Flavi_DEAD
COG4_N
Gp6_2nd
Motif
Other DBs
NCBI-GeneID:
13395046
NCBI-ProteinID:
XP_003849946
JGI:
Mycgr3_74526
UniProt:
F9XGV7
LinkDB
All DBs
Position
8:<693448..>695278
Genome browser
AA seq
400 aa
AA seq
DB search
MADEGIDRKAEERMEFSTSKEVTVAPTFEAMHLKENLLRGIYAYGYESPSAVQSRAIVQI
CKGRDTIAQAQSGTGKTATFSISTLQVIDTAVRETQALVLSPTRELATQIQSVLLALGDY
MNVQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVADMIRRRNLRTRNIKMLILDEADEL
LNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLK
QYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMRDANFTVSSMHGEMP
QKERDSIMGDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFG
RKGVAINFVTSEDVRILRDIELYYSTQIDEMPMNVADLLT
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaaggcatcgatcgcaaggcggaggagcgcatggagttctccacctccaag
gaagtcaccgtggcaccgacattcgaggcgatgcacttgaaggaaaacctgctgcgcgga
atctacgcatacggatatgagtctccctctgccgtgcagtcgcgagcgatcgttcagatc
tgcaaaggaagagacacaatcgctcaggcacagtcgggtaccggaaagacggccaccttt
agcatctccacgcttcaggtcatcgacacagctgtgcgcgagacacaggctctcgttctg
tcgccaacccgtgaactcgctactcaaatccagtctgtcctccttgcactcggcgactac
atgaacgtgcagtgccatgcatgcattggaggcacaaacgtgggcgaggacatccgcaag
ctggattacggtcagcacgtcgtttcaggaacaccaggaagagtagcagacatgattcgc
cgccgcaatctccgcacgcgcaacatcaagatgctcattcttgacgaggccgacgagctc
ctcaaccgcggtttccgtgagcagatctacgatgtctaccgatacctcccaccagccacg
caagtcgtcgttgtctcggccacactcccatacgatgtcctggacatgaccaccaaattc
atgaccgatccagtgcgcattctcgttaagcgtgatgagctgacactggaaggcttgaag
caatacttcatcgcagtcgagaaggaagagtggaaattcgacaccctttgcgatctttac
gacaccctcacgatcacacaagccgtcattttctgcaacacgcgacgcaaggtggactgg
ctgaccgacaagatgcgcgatgcgaacttcacggtctcgagcatgcacggcgagatgccg
cagaaggagcgcgacagcattatgggagacttccgccaaggtaactcccgtgtgctgatc
agcacggacgtgtgggctcgtgggatcgatgttcagcaagtcagtctggttatcaactac
gacttgccttcgaacagagagaactacatccaccgtatcggaagatcgggacgatttggg
cgcaagggtgtggcgatcaacttcgttacgagcgaagacgtgaggattctgcgcgatatt
gagttgtactactcgacccaaatcgacgagatgccgatgaacgtggcagatctcctgact
tga
DBGET
integrated database retrieval system
