Zymoseptoria tritici: MYCGRDRAFT_75505
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Entry
MYCGRDRAFT_75505 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCGRDRAFT_75505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ztr03041
]
MYCGRDRAFT_75505
03009 Ribosome biogenesis [BR:
ztr03009
]
MYCGRDRAFT_75505
Enzymes [BR:
ztr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MYCGRDRAFT_75505
Spliceosome [BR:
ztr03041
]
Complex A
U2 snRNP components
U2 related factors
MYCGRDRAFT_75505
Complex B
MYCGRDRAFT_75505
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
MYCGRDRAFT_75505
Ribosome biogenesis [BR:
ztr03009
]
Eukaryotic type
90S particles
Helicases
MYCGRDRAFT_75505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
Motif
Other DBs
NCBI-GeneID:
13399074
NCBI-ProteinID:
XP_003849735
JGI:
Mycgr3_75505
UniProt:
F9XJZ1
LinkDB
All DBs
Position
9:complement(868057..870517)
Genome browser
AA seq
554 aa
AA seq
DB search
MNDHDLKRYSVIILDEAHERTLATDILMGLLKEVIKRRPDLKIIIMSATLDAQKFQKYFM
DAPLLAVPGRTHPVEIFYTPEPERDYVEAALRTVLQIHATEADGDVLLFLTGEEEIEEAC
RKIQMEADEMIREADAGPLKVYPLYGSLPPAQQQRIFDPAPPPYKSGGRPGRKVIVSTNI
AETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFR
LYTEAAFKKELIDQSYPEILRSNLASTVLELKKLGIDDLVHFDLMDPPAPETLMRALEEL
NYLACLDDEGDLTALGKLASDFPLDPALAVMLISSPEFYCSNEILSLTALLSVPQLFNRP
AAARKRADEMKALFAHEDGDHLTMLNVYHAFKGPEAQANPKQWTHDHFLSFRALQQADNV
RMQLKRIMEREEVELISTPFTDKNYYNNIRRALVSGFFMQVAKKDSSGKSYTTVKDNQAV
LLHPSTVLGQDSEWVVYNEFVLTSKNYIRTVTAVKPEWLLDIAPNYYDVDAFPKGDVQTA
LRRVINKAQRKAGR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcatgatctcaagaggtacagcgtgattattctggatgaggcccacgagcgt
actcttgccacggatatcttgatgggtctgctgaaggaggttatcaagcggagaccggac
ttgaagatcatcatcatgtctgccacgctcgatgcgcaaaagtttcagaagtacttcatg
gacgcccctctgctcgctgtgcctggtcggacacatcctgtcgagattttctatacgccg
gagccggagcgagactatgttgaggctgcgctgcgaacggtcctgcagattcacgctaca
gaagccgatggtgatgtgttgctgtttttgactggagaggaggagattgaggaggcatgt
cgcaagattcaaatggaggccgatgagatgatccgggaagcagatgccggacccctgaaa
gtatacccgctatacggatctctgccgcctgcacaacaacagagaatctttgacccagca
ccaccaccttataagtccggcgggcgacctggtcgcaaggtcattgtgtcgaccaacatc
gccgagacatctctcaccatcgacggcattgtgtacgtggtggatcctggtttcagcaag
caaaaggtgtacaaccctcgaatccgtgtcgagtctctgctggtgtccccgatcagtaaa
gcctctgcacagcaacgagcaggtcgtgcaggtcgtacgcgtcctggaaagtgcttccgt
ctttacactgaagccgctttcaagaaggagctcatcgatcaatcctacccagagattctc
cgctcaaacctggctagcacggtcttggaattgaagaagctgggcattgacgatctggtg
cacttcgatctcatggatccacctgctcccgagacactcatgcgcgcattggaagagctc
aattaccttgcctgcctggatgatgaaggcgacttgaccgctctcggaaagctggcatca
gacttccctctcgaccctgcattagcagtcatgcttatctcaagtccggagttctactgc
tcgaacgagattctctcgctcacggctctcctctccgtcccacagctgttcaatcgccca
gcagcagcccgtaagcgtgctgatgagatgaaggcattgttcgctcatgaggatggagac
cacctgacaatgctcaacgtctaccacgcattcaaaggcccagaagcacaagccaacccc
aagcaatggacacacgaccacttcctgtcattccgtgcgctgcagcaagcggacaacgtt
cgcatgcagctgaagcgaatcatggagcgtgaagaggtcgagctcatctccacgccattc
accgacaagaactactacaacaacatccggcgtgctctggtcagtgggttcttcatgcag
gtggcgaagaaggattcaagcggcaagagctacacgactgtgaaggacaatcaagctgtc
ctcttacatccatcgacggtacttggtcaggactcggaatgggtggtctacaacgagttc
gtgcttacgagcaagaactacatccgtactgtcacggctgtgaagccagagtggctgctg
gatattgcacccaattactacgatgtcgatgctttcccaaagggtgatgtacagacggcg
ttgcggagagtgatcaacaaggctcagcgtaaggctggcaggtag
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