Zymoseptoria tritici: MYCGRDRAFT_76271
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Entry
MYCGRDRAFT_76271 CDS
T02285
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03030
DNA replication
ztr03410
Base excision repair
ztr03420
Nucleotide excision repair
ztr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYCGRDRAFT_76271
03410 Base excision repair
MYCGRDRAFT_76271
03420 Nucleotide excision repair
MYCGRDRAFT_76271
03430 Mismatch repair
MYCGRDRAFT_76271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ztr03032
]
MYCGRDRAFT_76271
03036 Chromosome and associated proteins [BR:
ztr03036
]
MYCGRDRAFT_76271
03400 DNA repair and recombination proteins [BR:
ztr03400
]
MYCGRDRAFT_76271
DNA replication proteins [BR:
ztr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
MYCGRDRAFT_76271
DNA Replication Termination Factors
ELG1-RFC complex
MYCGRDRAFT_76271
Chromosome and associated proteins [BR:
ztr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
MYCGRDRAFT_76271
DNA repair and recombination proteins [BR:
ztr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
MYCGRDRAFT_76271
Check point factors
HRAD17(Rad24)-RFC complex
MYCGRDRAFT_76271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
nSTAND3
AAA_16
RCF1-5-like_lid
AAA_22
RuvB_N
Viral_helicase1
AAA_3
DNAX_ATPase_lid
Gp44_lid
Mg_chelatase
Rad17
AAA_assoc_2
MeaB
KTI12
AAA_5
NTPase_1
AAA_11
AAA_18
AAA_24
AAA_19
MIF4G
Motif
Other DBs
NCBI-GeneID:
13398614
NCBI-ProteinID:
XP_003848854
JGI:
Mycgr3_76271
UniProt:
F9XKQ1
LinkDB
All DBs
Position
10:682666..683827
Genome browser
AA seq
351 aa
AA seq
DB search
MARAESSKDAETNGVKANTRGAPANYELPWVEKYRPVFLDDIVGNTETIERLKIIAKDGN
MPHVIISGMPGIGKTTSVLCLARQLLGDAYKEAVLELNASDERGIDVVRNRIKGFAQKKV
TLPAGRQKIVILDEADSMTSGAQQALRRTMEIYSGTTRFAFACNQSNKIIEPLQSRCAIL
RYARLTDGQVVKRLYQICQAEKVEYSDDGIAALVFSAEGDMRQAINNLQSTHAGFGFVNG
DNVFRVVDSPHPIKVQAMIKNCQEQKIDDALDGLKELWDLGYSSHDIISTMFKVTKTIPS
LSEHTKLEFIREIGFTHMRILEGMQTYLQLAGCVAKLCKLNMKPQLFDLPK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagcagagtcatcaaaggatgccgagaccaacggagtcaaggcgaacacgagg
ggtgctcctgcaaactacgagcttccttgggtcgagaagtaccgcccggtattcctggac
gacatcgtcggcaacaccgagaccatcgaacgcctgaagatcattgcaaaagatggaaat
atgcctcatgtcatcatcagtggcatgcctggtattggaaagacgacctctgtcctctgt
ctcgcgagacagctactgggagatgcctacaaagaagcagtgctggagctgaacgcatcc
gacgagcgtggaatcgacgtggtgcggaatcggatcaagggtttcgcacagaagaaagtc
acacttccagcaggacgacaaaagattgtgatcttggacgaggcggacagcatgacatct
ggagcacaacaagcgttgagacgaacgatggagatctactcaggcacaacaagattcgcc
tttgcttgcaatcagagcaacaagatcattgagccgctacagtcgagatgtgcgatcctg
cggtatgctcgcctgacggatggacaagtggtgaagcggttatatcagatctgtcaggca
gaaaaggtggagtacagtgacgatggaattgctgcactggtcttcagtgccgagggtgat
atgagacaagcgatcaacaatttgcagagtacgcatgcagggtttggcttcgtcaatggc
gacaatgtcttccgtgtggtcgatagcccgcatcctatcaaggtgcaggcgatgataaag
aactgtcaggagcaaaagattgatgatgctctggacggcttgaaggagctgtgggatctc
ggctactcgtcgcacgacattatcagtaccatgttcaaggtcaccaagacgattccctcg
ctctcagagcacaccaagctggagttcatccgcgaaatcggcttcacgcacatgcgtata
ttggagggcatgcagacgtacttgcagctcgcagggtgcgtggccaagctatgcaagctg
aacatgaagccacagctgttcgatctgccaaagtga
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