Zymoseptoria tritici: MYCGRDRAFT_76890
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Entry
MYCGRDRAFT_76890 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MYCGRDRAFT_76890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_76890
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
MYCGRDRAFT_76890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_C
HAT
UTP6_C
Motif
Other DBs
NCBI-GeneID:
13396155
NCBI-ProteinID:
XP_003848595
JGI:
Mycgr3_76890
UniProt:
F9XN60
LinkDB
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Position
11:complement(906075..908865)
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AA seq
807 aa
AA seq
DB search
MPAAQMRLPHDKVGQLEDRIKDDPKGDTDAWLSLIKHYYDKTQYQGARDVYKRFLAVFPT
AVSMWVKYIQMENELDERDNVVHILGESVMTVPSVELWKLYLDHVRRALPLINDAGGKNR
TEITKAFDVTLDNVGIDPDAGILWREYIDFVRDGPGMVGGQDWQDLQKVDQLRKAYQRAT
KLPHSESVKLWKEYENFEMGLHKATGRKHVQEQSPHYMQARTARMQLEQKLDGLDRRSIP
VLPPLYGCAGEDEFGNQVEKWRSWIEWEKNEDPLVFKGTEDDAWRRRVLYAYKQATLFLC
FYPPIWFEAASWCFSQGIDSFTTEGEQFLDKGMATNPESVLLAMSKADRVESSLETGNTE
EILIRNGDKLDVPYEQVHTALYAFRGRLKEKDDKTIAQINAHFASLSPEEEPTTVQEDDD
DDQPSNKPKTRAEQSKAAIDSVKQASAAHMDLLKRTISYVWVAKMRAFRRVQGQGKPPKK
GDTTSKVVKGFRGIFADARPRGQLSSDVYIASALLEWRCYKDPSAIKIFERGMKLFPLDE
VFILEYVKHLIALSDITNARVVFESTIPKIVNATDLSLEQKREKCRPLIAYMHDYESKYG
DLAQIHKIEKRMSELYPEEPEISRFSHRFSLPDFDAMHVQLVLSPTQARPRAFEPQQQAP
QQAPATSIENMHNSPRGAAPEILLGPNGPYVASPKRPLEDSDSEQPQRKFMRGESPLKGA
AGLRMQSKAGATSGGGFATKTFVPNSVSVPSGPPPLPPMIEYVLRLMPAARDYNQARFDA
VKIAYLVASTDVDSAKAAFSRGDLQRR
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagcgcagatgagacttcctcacgacaaagtcggccagctcgaggatcgcatc
aaggacgatccgaagggtgacaccgatgcttggctttcgctcatcaagcactactatgac
aagactcaatatcagggcgcaagagatgtgtacaagcgtttcctcgctgtctttccaact
gcggtctccatgtgggtaaaatatatccaaatggagaacgaactagacgagcgtgacaac
gttgtgcacattctcggtgagtctgtgatgacagttcccagcgtggaactttggaaactc
taccttgatcatgtgcggcgagcactccctctcatcaacgatgccggcggcaaaaaccgc
accgaaattacaaaggccttcgatgtcactctggataacgttggcatcgacccggatgct
ggtatactgtggcgcgagtacattgatttcgtgcgagacggccctggcatggtgggagga
caggactggcaggatcttcaaaaggtggaccaattgaggaaggcatatcaacgagccacc
aaactgccccattcggagtctgtcaagctgtggaaagagtacgagaactttgagatgggt
ctgcacaaggctacagggcgcaagcatgttcaagagcagagtccgcactacatgcaggca
cgcacagcgagaatgcagttggaacaaaagctggatggcctggatcggaggtctattcca
gtcctgccaccactgtatggatgtgcgggcgaggacgaattcggcaaccaggtcgagaag
tggcgatcgtggatcgagtgggagaagaatgaggatccgctggtgtttaaagggaccgag
gacgatgcttggcgcagacgcgtgctgtacgcttacaagcaggccactttgttcctatgc
ttctacccgccgatctggttcgaggctgcatcatggtgcttctcgcaaggaatcgactcc
ttcacaactgaaggcgagcaatttctcgacaaaggcatggctaccaatccggaatctgta
ttgctcgccatgtcgaaagcagaccgcgtcgaatcctcgctcgagaccggcaacaccgaa
gagatcttgatccgcaacggggacaaactcgatgtgccctacgagcaagttcataccgcc
ctgtatgcctttcgaggtcgactcaaggaaaaggacgacaagacgatcgctcagatcaac
gcgcatttcgcaagcttgtctcccgaggaagaaccgacgactgtgcaggaggacgatgat
gacgaccagccaagcaacaagcccaagactagagccgagcagtcgaaggcagcaatcgac
tctgttaagcaggcctcggctgcccacatggacctcctcaagaggacgatctcgtacgtc
tgggtcgcgaagatgcgggcgttccgaagagtacagggtcaaggcaaaccgccgaagaag
ggagacacaacctcaaaggtggtcaaaggcttccggggtatcttcgctgatgcaagaccg
cgcggacagctgtcaagtgatgtctacattgcctctgcacttctggagtggcgttgctac
aaggacccatctgccatcaagatctttgagcgaggcatgaagttgttccctctcgatgaa
gttttcattctggaatacgtgaagcacctcatcgctctcagcgacatcaccaacgcccgt
gtcgttttcgagtcaaccatcccaaagatcgtcaacgcgacagatctctcactggagcaa
aagagggagaaatgtcggcctcttatcgcatacatgcacgactacgaaagcaagtacggt
gatctggcccagattcacaagatcgagaaacgcatgtcagaactgtaccccgaagaaccg
gagatcagccgcttcagccatcgcttctctcttcccgacttcgatgccatgcacgtgcag
ctcgtattgagcccaactcaggcacgaccgagagcattcgagcctcaacagcaagcacca
cagcaggcgcctgctaccagcattgagaacatgcacaacagccccagaggagcagcaccc
gaaatcctccttggaccaaacggtccttacgtcgccagcccgaagcgtcctttggaagat
tccgacagcgagcagccacagcgcaagttcatgcgaggcgagtcgccactcaaaggtgcc
gctggcctgcgaatgcagagcaaggccggtgcaacgagtggaggtggctttgcaaccaag
acgttcgtgcccaacagcgtttctgtgccgtcaggacctcctcctctgccaccgatgatc
gagtacgtcctgcgcttgatgcctgccgctcgcgactacaaccaagcacggtttgatgcg
gtgaagatagcgtatctggtggcctcgactgatgtggactctgcgaaggcagcgttcagc
agaggggatttgcagcgacgatag
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