Zymoseptoria tritici: MYCGRDRAFT_92083
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Entry
MYCGRDRAFT_92083 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03013
Nucleocytoplasmic transport
ztr03015
mRNA surveillance pathway
ztr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCGRDRAFT_92083
09122 Translation
03013 Nucleocytoplasmic transport
MYCGRDRAFT_92083
03015 mRNA surveillance pathway
MYCGRDRAFT_92083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_92083
03041 Spliceosome [BR:
ztr03041
]
MYCGRDRAFT_92083
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MYCGRDRAFT_92083
TREX complex
MYCGRDRAFT_92083
Spliceosome [BR:
ztr03041
]
Complex C
Other components
EJC/TREX
MYCGRDRAFT_92083
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
MYCGRDRAFT_92083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
13404561
NCBI-ProteinID:
XP_003854067
JGI:
Mycgr3_92083
UniProt:
F9X6H5
LinkDB
All DBs
Position
3:3049228..3051105
Genome browser
AA seq
416 aa
AA seq
DB search
MKGREDVEGDAYHETSAVVLFDHNFQSLIVKALQDQVVRDLLSLPCRSHDRTISCPSSHP
TQRGGGRGRGGRGGGGGDRRPPPPRAPRREEYPRDGVRKGVPAVQYRRDEPANLDSYGCL
DEREMDHGLTRRSDWVHDRFEGERYDRSQRHAPVEDDRYAPRGAATTGGSKIRVDNIHYE
LTENDLRELFERIGPVASVRLLYDRADRSQGTAFVIYEDPRDASDAVQQFDGQNANGQAI
RMTLLPAGPAPSAPRGSLFDRIEKPPRSLFDRIDNGPDPRDDSRRRRQRSDSPRRGGGGR
AASDVDRYVPGGARGGERSPIRRRGTPREGGRRPGARREESGTGGRGGRGGRRPRTDEQG
HELVGGRPRKTAEELDAEMADYWGSKGGDDAPAGNGEATAASNGANGGAGDIDMDI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggagggaggatgtcgagggtgatgcttaccatgaaacctctgcagttgtgtta
tttgaccacaactttcaatctctgattgtcaaagcattgcaggatcaagttgtccgagac
ctgctatcgctgccttgtcgatcgcacgatcgcacgatctcctgtccatcttcacatcct
actcagcgcggcggaggcagaggcagaggaggccgtggaggcggcggaggtgacagacga
ccaccaccaccgagagcgcctcgtcgagaggagtatcccagagatggcgtacgaaagggc
gttcctgccgtacagtaccgacgcgatgaacccgccaacctcgactcgtacggatgtctt
gatgaaagagagatggaccatgggctgacgaggcgtagcgactgggtacacgatcgattc
gagggagaacgatacgaccgctcgcagagacatgcgccagttgaagacgatcgttatgct
ccgcgtggtgccgcaaccactggtggaagcaagatccgtgtcgacaacatccactacgag
ctcacagagaacgaccttcgcgaactattcgaacgcataggcccagtcgcttccgtccgc
ctcctctacgaccgcgccgaccgctcccaaggaaccgcattcgtaatctacgaagaccca
cgcgacgcatccgatgcagtccagcaattcgacggccaaaatgccaacggtcaagcaatt
cgcatgaccctcctgcccgccggcccagcaccttccgcaccacgcggctcgctcttcgac
cgcatcgaaaagccaccacgcagcctcttcgaccggatcgacaatggtcccgaccctcga
gacgatagccgcagacgaagacagcgaagcgatagccctcgcagaggaggtggaggccga
gcggcatcagacgtcgaccgctacgtacccggaggagcccgcggcggcgagcgatcccca
atccgacgcagaggcacaccgcgtgaaggcggccgacgaccaggcgcgaggagagaggag
agtggcacaggtggacgtggaggcagaggaggacgccgcccacgtaccgatgaacaggga
catgaattggtgggtggacgacctcgcaagacggcggaagagctggacgctgagatggcg
gactattggggctcgaagggaggagatgatgcaccggctgggaatggcgaggcgactgct
gcgagcaacggagcgaatggcggtgccggggatatcgatatggatatttga
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