Zymoseptoria tritici: MYCGRDRAFT_94196
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Entry
MYCGRDRAFT_94196 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MYCGRDRAFT_94196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ztr03021
]
MYCGRDRAFT_94196
Enzymes [BR:
ztr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MYCGRDRAFT_94196
Transcription machinery [BR:
ztr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
MYCGRDRAFT_94196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
13401887
NCBI-ProteinID:
XP_003851674
JGI:
Mycgr3_94196
UniProt:
F9XEM2
LinkDB
All DBs
Position
6:2648434..2653602
Genome browser
AA seq
1722 aa
AA seq
DB search
MNSSQAVASQLQGVNFGCFTTEDVRALSARQITNSTTFDTLLNPVPGGLYSAELGQFGDN
ACATCGLKNPQCPGHAGHIELPVPCYHPTFMDQVLRLLRAACIYCGRLKMRRVAVARFIA
KLQLVRYGLLKELNQLDEVQSKIGKGKDATPAGSDEDENDDGDADAKAVALRFERYVKDA
IKNAKRNGTLSTEKTETTNNARKQIIREFMAAITVGKKCGNCNGINHNHRKDRYVKIFRK
PLLEKEHIAMVQAGMKAKDPVVEMRRKLRLESSRKRKRDEDEAVADLSNSSEEDGDDVDM
DDSSEGEPEIAGGIADESTASKTQPEIYLNPSRVHAQLVQLFEKDAEVLNLVYGGDSPGH
SGVSADMFFLNALIVPPNKYRPEAKTGDNEIAEAQENSLYKAVLNACERLTEIQRELSGT
EAPAVPRYRPSTYADFETTWLTLQESVNSLIDKNLSPLQGRAGARNADGVKQKLEKKEGM
FRKYMMGKRVNFAARTVISPDPNIETNEIGVPPVFAVKLTYPEPVTQWNIEEMQEAVRNG
AFIWPGALAIENENGSVLKLDRKNAEERTALANQLLAPAGSGNTRGTRPKKVHRHLNNGD
IVIMNRQPTLHKPSMMCHRARVLPGEKTLRMHYANCNTYNADFDGDEMNMHFPQNELARA
EALSIADTDHQYLSATAGNPLRGLIQDHISMCVWLTSRELFFERGDYMNLLYAALRPESG
HCANDRLETMPPAIMKPKALWTGKQVISTVLKNLTPPGCLGLTVNGKSTTAKTMWGPGGE
EEGDVVVKDGELLQGIIDKKQIGPSSGGLVNAIYEAYGHAVAGKFLSVLGRLLTKLLHMR
AFSCGVEDLIFTQKGEEDRRQALAGAQSIGLEVSAKYVGLADQKPTGEDRELQQRLEDVL
RDDAKQHGLDQVTNNATGKISSGVSEKCMPAGLAKPFPKNQMQTMTTSGAKGSKVNVNLI
SCALGQQVLEGRRVPIMVSGKTLPCFKPFESNVRAGGYIVDRFLTGIRPQEYYFHAMAGR
EGLIDTAVKTSRSGYLQRCLIKGMEGLKVEYDTSVRNTEDGSIVQFLYGEDGLDIGKAKY
LSDFKFAAENYISLYNNLEMNDNMASLISEEAKEHNKAAEKKYRKTGDLGASDPALAVYP
PARHAGSISEKLLATSRSWVDTNTERLIKDKKHGIDGPRTVSKKNFNAILEMRYLRSIVE
TGEAVGVVAGQSVGEPSTQMTLNTFHLAGHAAKNVTLGIPRLREIVMTAATNLATPTMTL
RLNDDVDVEGAKKFAKGISKLSLGEIVDKVSVTESTGKGVAYAEAKRYEIKLDFFPAEEY
SKEYAITISDVVNTIEHRLLPRLQATTRKELKKRGDAKTLKTAKDDAMPDIGKSAGAIEQ
ESNRPEANREGGDDDSDSEGDDDATRDKMKSNKQQAGYEAYEDEDEQVLKQRDATPEPEE
SSDEDEAYGGSPRSTPDVEDSSPRVSSAKDREIRIKSDAKTNDIIAFSFDDKKGATCSFT
LEYDSATAKILMLHLLESALHASLIQSVPGIAMCMIDEEAMNEAKKDGIHSDAILAASGV
NIPAMWELQHIIHPHHLYTNSIHDILVHYGVEAARNAIVKELAGVFGGHGISVDPRHLML
IADYMTRDGVYQAFSRMGYRGNPSPFMKMSFETTVNFLRDAVLEGEGDNFAGPSARIVAG
RIGGVGTGGIDVFLPVDAAEKEGGEEEMILAADEDGDVEMED
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgaattcttcacaagctgtggcatcacagctacaaggcgtgaactttggatgcttcacc
actgaggatgtcagagctctttctgcccgacaaatcaccaacagcaccaccttcgatacc
ctcttgaacccagtacccggcggactctacagcgcggagctgggacaattcggcgacaat
gcgtgcgcaacatgtggattgaagaatccgcaatgtcctggacacgctggacacattgag
ctgccagtgccatgctaccacccgacattcatggatcaagtgctgagactgctgcgggcg
gcgtgcatctactgcggtagactcaagatgagacgagtggcggtcgcacggttcattgca
aagctacaactcgtacgatacggcttgttgaaggagttgaaccagctggacgaggtgcag
tcaaagatcggcaaagggaaggatgccactccggccggatctgatgaggatgagaacgat
gatggagatgcggacgcaaaggcagtggcattacggttcgagcgatatgtcaaggacgcc
atcaagaatgcgaagcgaaatggcacactttccaccgaaaagaccgagaccacgaacaat
gcaaggaaacagataatacgagaattcatggctgcgatcactgtcggaaagaagtgcgga
aactgcaacggcatcaatcacaatcatcgaaaggatcgatacgtcaagatcttcaggaaa
ccgctgctggagaaagagcacatcgccatggttcaggctgggatgaaggcgaaggatccg
gtggtggagatgcggcgaaagctgaggctggagagtagtcgcaagcggaagagagacgag
gatgaggcagtcgcagatctgagtaatagctcggaagaagacggcgatgacgtggacatg
gacgattcctccgagggcgagccagagatcgcaggcggcatcgcggacgagtccactgcg
agcaagacacagcctgagatctatctcaatccaagtcgagtccacgcacagctcgtgcag
ctattcgagaaggacgcggaagtcttgaacctcgtctatggaggagacagcccaggccat
tccggtgtctcagccgacatgttcttcctgaatgcgttgatcgttcctccgaacaagtac
cgacctgaggcaaagactggcgacaatgagattgccgaagcacaagagaactctctgtac
aaggcagtgctgaatgcctgcgaacggttgaccgagatccagcgtgagctcagcggcaca
gaagctccagcagtaccacgataccggccgagtacctacgcagacttcgaaaccacatgg
ctcaccctgcaagagagcgtcaacagtctcatcgacaaaaatctctcaccattgcaaggt
cgcgcaggggcacgaaacgcagatggtgtcaagcaaaagctggagaagaaagagggtatg
ttccgaaagtacatgatgggcaagcgtgtcaactttgctgctcgaacagtcatctcgccg
gatcccaacatcgaaacgaacgagatcggtgttccgcccgtcttcgccgtgaagctcaca
taccccgagccagtgacgcagtggaatattgaggagatgcaggaggctgtgcggaacgga
gcattcatctggcccggtgctttggcgatcgagaatgagaatggatccgtgttgaagctg
gatcgaaagaatgcagaagagcggacagcgttggcaaatcaattgcttgctccagcagga
agcggcaacactcgtggtacgcggccaaagaaggtccatcgacatctgaacaacggcgac
attgtcatcatgaaccgccagcccactcttcacaaaccctctatgatgtgtcatcgcgcc
agagtcttgcccggagagaagacactgcgaatgcactacgccaactgcaacacgtacaac
gccgacttcgatggagacgagatgaatatgcatttcccacagaacgaattggctcgagca
gaagctctctcgatcgcggatactgaccatcagtacctttccgccactgctggtaacccg
cttcgaggtttgatccaagatcatatttcaatgtgtgtctggctgacgagtcgggaattg
ttctttgaacgaggagactacatgaaccttttatacgctgcacttcgacctgaaagcggg
cactgcgcaaatgatcgcctcgagacaatgccgccagcgattatgaagccaaaggcactc
tggactgggaagcaggtgatcagcacggtgttgaaaaatttaacgccaccgggatgcctt
ggtctgaccgtgaatggcaagagcacaacagcgaagacaatgtggggtccaggaggagag
gaagaaggcgacgtagtggtcaaggacggagagttgctgcaaggtataatcgacaagaag
caaattggaccttcctccggaggtctggtcaatgcaatctacgaggcctacgggcatgcg
gtcgccggtaagttcctcagtgtcctaggacgactcttgaccaagctcctgcacatgcga
gccttctcttgcggtgttgaagatttgatcttcacacaaaagggtgaagaggaccgtcgt
caagcattggctggcgcacaatcgatcggactggaggtctcggcgaagtacgtgggccta
gcagatcagaagccgacaggcgaggatcgcgagctgcagcaacgactggaagacgttctt
cgtgacgatgcgaagcaacatggtcttgatcaagtcaccaacaacgccactggcaagatc
agctctggagtgtcggagaaatgcatgcctgcgggtcttgcgaagccttttccaaagaac
cagatgcagaccatgactacatcaggtgccaaaggatccaaggtcaatgtcaatctcatc
tcctgtgctctcggacaacaagttctggagggtcgcagagtgcctatcatggtcagcgga
aagacactcccatgcttcaagcctttcgagtcgaacgtccgcgctggagggtacattgtc
gaccgctttctgacaggcattcgtccacaagagtactactttcacgccatggccggtcgc
gaaggtctcattgatactgctgtcaagacctcccgctcaggatatctgcagcgctgtctc
atcaagggaatggaaggtctgaaagtggaatacgatacatctgtgcggaacactgaggat
ggtagtatcgtgcagttcctgtacggcgaagacggtcttgacattggcaaggcgaagtat
ctgtcagacttcaagttcgccgcggagaactacatttcgctgtacaacaacctggagatg
aacgacaacatggcttctttgatcagtgaagaagcgaaggagcacaacaaggcagcggag
aagaagtatcgcaagaccggagatctgggtgctagcgatcctgcactggccgtgtatccg
cccgctcgacatgctggaagcattagcgagaagctccttgcaacctcaagaagctgggtc
gacaccaataccgaacgactcatcaaggacaagaagcacgggattgacgggcctcgcacg
gtctccaagaagaacttcaacgccattttggagatgcgctacctgagatccattgttgag
actggcgaagcagtcggtgtcgtcgccggacagtctgtcggagagcccagtacgcagatg
actttgaacactttccatctggctggtcacgctgcgaagaacgtcaccttgggtattcct
cgtctgcgtgagattgtcatgacagccgcgacgaatcttgctacacccaccatgaccttg
cgcctgaacgatgatgtcgatgtggaaggcgccaagaagtttgccaagggcatcagcaag
ttgagcttgggcgagattgtcgacaaagtcagcgtgaccgagtcgactggcaagggtgtt
gcgtatgccgaggcgaagagatatgagatcaagcttgatttcttcccagcagaggaatat
tccaaggagtacgccattacgatcagcgatgtggtgaacaccatcgagcatcgcctgttg
cctcgcttgcaagccaccacgcgcaaggagttgaagaagcgcggcgatgcgaagacgtta
aagactgccaaggacgacgcgatgcctgacattggaaagtctgccggcgccatcgagcag
gaaagcaaccgtccggaggcgaatcgcgagggtggagatgacgactctgacagcgagggc
gatgatgatgcaacgcgcgacaagatgaagagcaacaagcagcaagctgggtacgaagca
tacgaagatgaggacgagcaggttctcaagcagcgtgatgcaactccagagccggaggag
tcttccgatgaagacgaagcctatggaggctcaccgcggtcaactcctgatgtcgaggac
tcttcgcctcgcgtatcctcagccaaagaccgcgagatccgcatcaaatccgacgccaaa
acgaacgacatcatcgccttctccttcgacgacaagaagggcgccacctgctccttcact
ctggaatacgactccgcaaccgcaaagatcctcatgcttcaccttctcgaatccgccctc
cacgcctccctcatccaatctgtacccggcatcgccatgtgcatgattgacgaagaagcc
atgaatgaagccaagaaagatggcattcactccgacgccatcctcgccgcttcgggcgtc
aacatcccggccatgtgggaattgcaacacatcatccacccgcatcacttgtacacgaac
tcaatccacgatatcttggtgcactacggtgtcgaagccgcgcgcaatgctattgtcaaa
gagttggcgggtgtctttggcggtcacggtatctctgtcgatcctagacatttgatgctc
attgcggactacatgactagagatggtgtgtaccaggctttcagtcggatggggtataga
ggtaacccgagtccgttcatgaagatgagtttcgagacgacggtgaattttttgagggac
gcagtgttggagggtgaaggggataattttgcgggacccagtgcgaggattgtggcgggg
agaattggtggggttgggacgggtggcattgatgttttcttaccggttgatgcggcggag
aaggagggtggagaggaggagatgattttggcggcggatgaggatggtgatgttgagatg
gaggactaa
DBGET
integrated database retrieval system