Zymoseptoria tritici: MYCGRDRAFT_99853
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Entry
MYCGRDRAFT_99853 CDS
T02285
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03020
RNA polymerase
ztr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MYCGRDRAFT_99853
09124 Replication and repair
03420 Nucleotide excision repair
MYCGRDRAFT_99853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ztr03021
]
MYCGRDRAFT_99853
03400 DNA repair and recombination proteins [BR:
ztr03400
]
MYCGRDRAFT_99853
Enzymes [BR:
ztr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MYCGRDRAFT_99853
Transcription machinery [BR:
ztr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
MYCGRDRAFT_99853
DNA repair and recombination proteins [BR:
ztr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
MYCGRDRAFT_99853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
13397236
NCBI-ProteinID:
XP_003853498
JGI:
Mycgr3_99853
UniProt:
F9X8C0
LinkDB
All DBs
Position
4:complement(891709..895661)
Genome browser
AA seq
1231 aa
AA seq
DB search
MITAEDCWTVIHSFFDEKGLVSQQLDSFDEFASTTMQQIVDDQPAIVIDQNLAGLDEESG
MPIVKKRSSIKLGTLTVSQAAMTEGDGSTRAMHPHEARLRNLTYSSPMFIKLEKTTQLAR
ERALGGHYDEDQGMWVAPPNWDGTVETVWEEDPDNPKQAIDQVFIGKLPVMLKSKICALR
NRSEAELYAFQECPFDQGGYFIINGSEKVLIAQERSAANIVQVFRKKGTNTPVVAELRSA
VERGTRLISSMQVKLCNQAVAAQHSGQTIKVSLPYIRADVPIAIVFRAMGVVSDEDILAH
ICPEEDTQMREKLKPCLEEAFVIQDHDVALDHIGRRGQQQGTKDRRIRYARDIMQKEFLP
HISQEEGSETKKAFFLGYMVNRMLQCALGRTEEDDRDHFGKKRLDLAGPLMAQVFRLKFQ
QLVKDMRQYLHRCVETGKDFNIALAVKTNIITSGLRYCLATGNWGDQKKAASAKAGVSQV
LNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLM
CYVTVGTPGEPIVDFMRQRGMDLLEEHDPNQVKDATKVFLNGTWVGVHKSAGQLTETLRQ
LRRKGLLSFEVTIIRDVREREIRVFTDAGRVCRPLFVVDNNPKSLEPGTLMLKQDHVERL
HQDQELLASLEGVSEEDREQQLFGWKGLVTSGVVEYLDAEEEEVAMIIMTPEDLEEHRVM
RNGMAVEELKVDPHRRIKPKPNPQVRTYTHCEIHPAMILGICASIIPFPDHNQSPRNTYQ
ATMGVTLTNYNVRMDTMANVLYYPQKPLATTRSMEFLKFRDLPAGQNAIVAIACYSGYNQ
EDSVIMNQSSIDRGLFRSLFYRAYMDQEKRVGMSVVESFEKPTRSDTMRMQHGTYDKLDE
DGIISPGARVSGTDILIGKTAPMPPDAEELGQRTKLHVKRDVSTPLRSTENGVVDQVLLT
TNTEGLRFVKVRTRVTKVPQIGDKFASRHGQKGTIGITYRQEDMPFSADGLTPDIIINPH
AIPSRMTIAHLIECLLSKVGALQGQEGDATPFTEVTVTSISEILKSNGFQQRGFEVMYNG
HTGKKLNAQVFLGPTYYQRLRHMVDDKIHARARGPLQILTRQPVEGRARDGGLRFGEMER
DCMIAHGASAFLKERLLDVSDAFRVHICELCGLMTPIASIKKQQFECRPCKNKTKIAQII
IPYAAKLLFQELAAMNVATRMFTTRSGVSIR
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgatcacggccgaggattgctggacggttatccactctttcttcgatgaaaagggtctg
gtctcccagcaattggactcgttcgatgaattcgctagcacgacaatgcagcagatcgtg
gacgaccagccagcgattgtgattgatcagaacctggctggactggacgaagaaagcggt
atgccgatcgtgaagaagcgctcgagtatcaagctcgggactcttacggtcagccaagca
gccatgaccgagggcgacggtagcacgagggccatgcaccctcacgaggctcgtctacgg
aatttgacttattcatcacccatgttcatcaagctggagaagacaacacaactggcgcga
gaaagagcactgggtggacactacgacgaggatcagggcatgtgggtagcgccaccgaac
tgggacggcacagtggagacggtctgggaggaagaccccgacaatcccaagcaggctatc
gatcaagtcttcattggaaagctgccagtcatgctgaagtcgaagatctgcgcattgagg
aatcgaagcgaagcagagctttatgctttccaagaatgcccattcgatcagggaggatat
ttcatcatcaacggtagtgagaaggtgttgatcgcacaagagcggagtgctgcaaacatc
gttcaggttttccgaaagaagggcacaaacacaccggttgtggcggagctgcgaagtgcc
gtcgagcgaggaacacgcttgatcagctcgatgcaggtcaagctctgcaatcaagcagtg
gcagctcagcattctggacagaccattaaagtctccctcccatacatcagggccgatgtg
cccatcgctattgttttccgtgcgatgggtgtagtttccgacgaggatatcctggcacat
atctgtccagaggaggatacacaaatgcgagagaagctcaagccttgtttggaagaggca
ttcgtgattcaggaccatgacgtcgcgctggatcatattggaagacgtggacagcagcag
ggcaccaaggatcgccgtatccgatacgcacgagatatcatgcaaaaggagttcttgcct
cacatctcgcaagaagagggcagtgagacgaagaaggcgttcttcctgggatacatggtc
aatcgcatgcttcagtgtgcgcttggacggactgaggaagacgatcgtgatcatttcgga
aagaagcgtctcgatttggcaggacctttgatggcgcaggttttccgtttgaagttccaa
cagttggtgaaggacatgaggcagtacctccaccgatgcgtggagactggtaaggacttc
aacattgcgctcgcggtcaagacaaatatcatcacatcgggtttgcgatactgcctggcg
actggaaattggggtgaccaaaagaaggccgcaagcgcaaaagctggtgtgagtcaagtg
ctgaacagatacacctacgcctcgaccttgagtcatttgcggcgaacgaacacccccatc
ggtcgtgacggcaagattgcgaagccgagacaactgcacaacactcactggggtctcgtc
tgcccggccgaaacgcccgaaggacaagcttgtggtctggtaaagaacttgtctctgatg
tgctatgtaaccgttggaacgcccggcgagcctatcgttgacttcatgcggcaacgtgga
atggaccttctcgaggaacacgatccgaaccaggtcaaggatgcgaccaaggtcttcctg
aacggtacctgggtgggtgtacacaaaagtgccggacagctcacagagactttacggcaa
ctccgacgaaagggtcttctcagtttcgaagtcaccatcattcgagacgtgcgcgagcgc
gaaattcgagtcttcacagacgctggacgtgtctgccggcctcttttcgtggtggacaac
aaccccaaatcattggagccgggcactcttatgctgaaacaagatcatgttgagagactt
caccaagatcaagaacttctcgcctcgcttgaaggcgttagtgaagaagatcgcgagcag
cagctcttcggttggaagggtctggtcaccagcggagtggtcgagtaccttgacgctgag
gaagaagaagtcgccatgatcatcatgacgcctgaggatcttgaagagcacagagtcatg
cgcaatggcatggccgtcgaggaactcaaggtcgacccgcatcgacggatcaagccgaaa
ccgaacccacaagtccggacatacacacattgcgagattcatcctgcgatgattctgggc
atttgtgccagcatcatccccttcccagatcacaaccagagtcctcgcaacacgtatcag
gcaaccatgggtgtcacgttgacaaactacaacgtacgaatggataccatggcaaatgtc
ctctactatccacaaaaacctcttgcaaccacacgaagtatggagttcttaaagtttcga
gacttgcccgccggccagaatgccattgtggcgattgcttgctactccggttacaaccag
gaagattccgtgatcatgaaccaaagcagtatcgatcgtggtctcttcagatcgctgttc
taccgcgcgtacatggaccaggagaagcgcgtgggcatgagtgtggtcgagtccttcgag
aagcccacccgatcggataccatgcgcatgcaacacggcacatacgacaagctagacgaa
gacggcatcatcagtcctggtgctcgtgtatccggtactgacatccttatcggaaagacc
gcgcctatgcctccagatgccgaggagctcggacagagaacgaaactccacgtcaagcgc
gatgtcagcacacccttgagatcgactgagaacggtgtggtcgaccaagtacttctcaca
accaacaccgaaggtctgcgattcgtcaaggtccgaacacgagtcacgaaagtgccacaa
atcggagacaagttcgcctctcgtcacggacaaaagggtaccatcggtatcacctaccgc
caagaagacatgcctttctccgcagatggtctcacacccgacatcatcatcaatccccac
gccattccctcccgtatgacaatcgcccatttgatcgagtgtctcctctccaaggtcggc
gccctccaaggccaagaaggtgacgccacacctttcaccgaagtcactgtcacctccatc
tctgagatcctgaagtccaacggcttccaacagcgtggattcgaagtcatgtacaatggc
cacaccggcaagaaattgaatgcgcaggtcttcctcggtccgacatactaccaacgtcta
cgccacatggtcgacgacaaaatccacgctcgtgcccgtggaccgctacagatcctgacc
cgacaacctgtggaaggtcgcgcgagagacggtggcctgcgtttcggagagatggagcgc
gattgcatgatcgcccatggcgccagcgccttcctcaaggagcgactcctggacgtgtcg
gatgcctttcgcgtgcacatctgtgagctgtgtggtctcatgacgcccattgcgagtatc
aagaaacagcagtttgaatgtcgtccatgcaagaacaagacgaagattgcgcagatcatc
attccgtatgcagcgaaattgctgttccaggagttggcggcgatgaatgtggcgacgagg
atgttcacgacgaggagtggggttagcattcggtag
DBGET
integrated database retrieval system
