Zootoca vivipara (common lizard): 118075229
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Entry
118075229 CDS
T07275
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118075229 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zvi03021
]
118075229 (SMARCA2)
03036 Chromosome and associated proteins [BR:
zvi03036
]
118075229 (SMARCA2)
Transcription machinery [BR:
zvi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118075229 (SMARCA2)
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
118075229 (SMARCA2)
Chromatin remodeling factors
BAF complex
118075229 (SMARCA2)
PBAF complex
118075229 (SMARCA2)
GBAF(ncBAF) complex
118075229 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
SnAC
HSA
BRK
QLQ
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
118075229
NCBI-ProteinID:
XP_034953017
LinkDB
All DBs
Position
LG16:complement(681658..792513)
Genome browser
AA seq
1519 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGLSPGPILGPSPGPGPSPSSVHSMMGPSPGPPSVPHAMPAM
GPSDYPPEGIHPMHKPIDGLHEKGMVEDLHNSAMKTASMRPPHPGMGPPQSPRDQHSQGY
MSPHPSPLGPAPEHVSSPMSGGGPTPPQMPPSQPGPTMPGDPQAMSQPGRGPSPFSPVQL
HQLRAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQALYKPTVFAAHAGAPLPAGP
GAASGMPAHTAAMAPKTWPEGQGPEMNVPSTPQKLPVPSPSGRPSPAPAPAQPAPVMPGP
SVPPPAAGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRKRKKKAEDSTEGMGSGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSEFEEDEDDEDSSRPETDEKRHLDPN
SEDVPERDAKKIIETAKQDVDDEYSMHEYSAGESQSYYTVAHAIAERVEKQSSLLINGTL
KHYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMDHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFAYLRLDGTTKSEDRAALLKKFNEPNSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQVIYRPQSFPPPPPPLLLLLIIIREWPKTLQTSSQFQAPSLPEMSQRRPVLSL
QRMDLDRRREDARNPKRKPRLMEEDDLPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRD
VDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEAKAKKRRGRPP
AEKLSPNPPKLTKQMNAIVDTVINYKDSSGRQLSEVFIQLPSRKEYPEYYELIRKPVDFK
KIKERIRNHKYRSVSDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEE
ESEDESNEEEEDEEDESESESKSVKVKIKLNKKEDKNREKGKGKKRQSRVKAKPVVSDDD
SDEDQDENDQSEASGSDDE
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgtctactccgacagatcccggcgccatgcctcatcctggcccttccccggggccaggg
ctctctcctggacccatactgggtcccagcccagggccgggtccctcgcccagttcggtg
catagcatgatgggaccgagtcctggacctccaagcgttccgcatgccatgcctgctatg
ggaccgagtgattacccgccagaaggaatccacccaatgcacaaacccattgatggtttg
catgagaaaggaatggttgaagacctgcacaacagcgccatgaagaccgcgagcatgcgc
cctcctcaccccggcatggggccgccccagagcccaagggatcagcacagccaaggctac
atgtctccccacccgtcgcctttgggaccagcccccgagcatgtctccagccccatgtcc
ggagggggccccaccccgccccaaatgccgccaagccagccgggacccacgatgccagga
gacccacaagctatgagccagcccggccggggaccttcgcccttcagtccggttcagctg
caccagctccgggcgcagattctggcgtacaagatgttggccagggggcagccactgcct
gaaaacctccagcttgccgtccaggggaaaaggactctgcccgggattcagcagcaacag
gccctttacaagccaacggtttttgcagcccacgccggcgcccccctcccagctggacca
ggagctgcctcaggaatgccagcgcacacggctgccatggcccccaaaacctggccagaa
ggacaagggccagagatgaatgttcccagcacccctcagaagctccctgtcccgtccccc
agcggaagaccttctcctgcgcctgcgcctgcccagccggcgcccgtcatgccaggccct
tcggttcctccgcccgcagccggccagccttcgcccattgtccagctgcagcagaagcag
aaccgcatcagccccatccagaagccccaagggctggatcctgtggaaatcctccaagaa
cgggaatataggcttcaggcacggatcgcgcacagaattcaggaattggaaaacttgcct
ggctctttgcccccagacctgcgaactaaggccacggtggagctcaaggccctccggctg
ctgaatttccagcgccagctcaggcaggaggtggtggcttgcatgcgccgcgacacgacg
ctggagacagctctgaactcgaaggcctacaagcgcagcaagcgccagaccttgcgggaa
gcgcggatgacggagaaactggagaagcagcagaagattgaacaggagcggaaacggagg
cagaagcaccaggagtatctcaacagcatcttgcaacacgctaaggacttcaaagagtac
catcggtccgtggctgggaaaatccagaagctgtccaaagctgtggccacgtggcacgcg
aacacggagcgtgagcagaagaaggaaacggagaggattgagaaagagcgaatgcggcgg
ctgatggctgaagatgaggaaggctaccgcaagctgattgaccagaagaaggaccggcgc
ctggcttacttgctgcagcaaacggacgaatacgtggccaacctgacgaatctggtttgg
gagcacaagcaagctcaggcggccaaggagaagaagaagaggaggaagagaaagaagaaa
gcagaagacagtacagaaggcatgggatccggacttggtccggatggagagcccattgat
gagagcagtcagatgagtgatctccccgtcaaggtaactcacacggaaacagggaaagtt
ctccttggaccagaggctccgaaagcaagtcagctggatgcctggctagaaatgaaccct
gggtatgaagttgcacccaggtcagacagcgaagaaagtgattctgagtttgaggaagat
gaagatgatgaggattcaagtaggccagaaacagacgaaaagcgacacctggatccaaac
agcgaagacgttccggaaagagacgctaagaagatcattgagacggccaaacaagatgtg
gacgatgagtatagcatgcacgaatacagcgccggggagtctcagtcgtactacactgtg
gcgcacgcaatagccgagagggtcgagaagcagtcttcccttctgattaatggcacattg
aaacattaccagatccagggcctggaatggatggtttctctgtacaataacaatctgaat
gggattttggctgacgaaatggggctcggaaagaccatacagaccattgccctcatcact
tacctgatggaccacaaaaggctcaatggcccctatctcatcatcgttcccctctcgact
ttatccaactggacttacgagtttgacaaatgggctccttctgttgtgaaaatctcctac
aagggcacccctgcgatgcgccggtcccttgtccctcagctccgtagcggaaaatttaat
gttcttttgacgacttacgagtacataataaaggacaagcacattcttgctaagattcgg
tggaagtatatgattgtagacgaaggccatcgcatgaagaaccaccactgcaagctcact
caggtgctgaacacgcactacgtcgccccgagaagaatcctcctgacggggacacccttg
cagaacaagctgccggaactttgggctctgctgaatttcctcctcccaaccattttcaag
agctgcagcacctttgagcagtggttcaacgccccttttgccatgaccggagaacgggtg
gatttaaatgaggaagagaccattctgatcatccggcgcctccacaaagttctccgtcct
ttcttgttacggaggctgaagaaagaggttgaatctcagctgccagaaaaggtggaatat
gtgatcaagtgcgatatgtcagctctccagaagatcttgtaccgccacatgcaagccaaa
gggatcctcctcacagatggctccgagaaagacaagaagggcaaaggtggcgccaagact
ctaatgaacaccatcatgcaattaagaaagatctgcaaccacccctatatgtttcagcac
attgaggaatcctttgctgaacatttgggctattcaaatggtgtcatcaatggagctgag
ctttatcgggcttcggggaagtttgagctgctcgatcgaattttgccaaagttgcgagcc
accaaccaccgcgtcctcctcttctgtcaaatgacgtccctcatgaccatcatggaagac
tattttgcttttcggaattttgcttacctgcgacttgatggaacgacgaaatcggaggac
cgggcagccctgctgaagaagttcaacgagcccaattcccagtatttcatctttctgttg
agcacgagggcaggagggctgggcttgaacctccaggcagcggataccgtcattattttc
gacagcgactggaatcctcaccaggttatttacagaccacaatcatttcctcctcctcct
cctcctcttcttcttcttctaataataataagagaatggccaaaaactctgcaaacctcc
agccagttccaagctcccagcttgccagaaatgtctcaacggcggcctgtgttgtccctg
cagcgaatggacctggaccggcgcagagaagatgctcgcaatcccaagcggaagccgcgc
ttgatggaggaggacgacctgccgtcttggataatcaaggacgatgccgaagtggaaagg
ctcacctgcgaagaggaggaggagaaaatatttgggagggggtcccgccagcgcagggat
gtggactacagcgatgctctgacggagaaacagtggctgagggcaatcgaagacggcaac
ttggaggagatggaagaagaagttcggcttaagaaacggaaaaggaggagaaatgtagac
aaagattcgggcaaagaggatggagaggcaaaggcgaaaaaaaggagagggaggccgccg
gcggagaagttgtcacccaaccctcctaagctaacaaagcagatgaatgccatcgttgat
actgttatcaattacaaagacagctcaggacgacagttaagtgaagtcttcattcagctg
ccttccagaaaagaatacccagaatactatgaattaattagaaagccagtggatttcaaa
aaaattaaggaaagaattcgtaaccataaatatcggagtgttagcgacctggagaaggac
gtgatgttgttgtgtcacaatgctcagaccttcaacttggaaggatcgcagatctatgag
gactccattgttctgcagtcggtgttcaaaagtgcgcggcagaagatcgccaaagaagag
gaaagcgaggacgaaagcaacgaggaagaagaagacgaggaagatgagtcggaatccgaa
tccaaatctgtgaaagtaaaaatcaagctaaacaaaaaggaggataaaaacagggagaaa
ggaaaaggcaagaagcggcaaagtcgagtcaaagccaaaccggttgtgagcgacgatgac
agcgatgaggatcaagatgagaatgaccagtcggaagccagcggaagtgacgacgagtga
DBGET
integrated database retrieval system
