Zootoca vivipara (common lizard): 118075444 Help Entry 118075444         CDS       T07275                                  Symbol VPS39 Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism zvi  Zootoca vivipara (common lizard) Pathway zvi04140   Autophagy - animal zvi04148   Efferocytosis zvi05132   Salmonella infection Brite KEGG Orthology (KO) [BR:zvi00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     118075444 (VPS39)    04148 Efferocytosis     118075444 (VPS39)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     118075444 (VPS39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:zvi04131]     118075444 (VPS39) Membrane trafficking [BR:zvi04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     118075444 (VPS39) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin Beta-prop_RIG_2nd Lgl_C Motif Other DBs NCBI-GeneID:  118075444 NCBI-ProteinID:  XP_034953314 LinkDB All DBs Position LG1:complement(41740895..41770690) Genome browser AA seq 892 aa AA seqDB search MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKETGCNRFEVTLEKSNK NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGATLFTCDLKHSATGE EVLRMCVAVKKKLQLYYWKDREFYELQGDFSVPDVPKSMAWCEDSICVGFKRDYYLIRVD GKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGTCTQKSIDSLFPNVNLGN TIVEPYAVADCSIFKTEHQPPYIVAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGTNI VYVASNHFVWRLIPVSIATQIQQLLQDKQFELALQLADMKDDSDTEKRQQIHHIKNLYAF NLFCQKRFDESMQVFAKLGTDPTHVMGLYPELLPSDYKKQLQYPNPVPVLSPAELEKAHL ALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVA LVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLK GHERTVQYLQHLGTDNLNLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRNKVLSFLIE NFKNLAVPYLEHIIQTWEEAGSEFHNCLIQLYCEKVQGLMKEYLSSFPPDKLPVAAGEEE GELGEYRQKLLFFLETSSCYNAEQLISDFPFDGLLEERALLLGRMGNHEQALFIYVHILK DTKMAENYCHKHYDKSKDGNKDVYLSLLRMYLSPPSVHCLGPIKMKLLEPQANLQAALQV LELHHSKLDTTKAINLLPANTQISEIRIFLEKVLEENAQKKRFSQVLKNLLHAEFLRVQE ERILHQQVKCIITEEKLCSVCKKKIGNSAFARYPNAIVVHYFCSKEVSAVDT NT seq 2679 nt NT seq  +upstreamnt  +downstreamnt atgcacgacgccttcgagccggtgccgattctggagaaactgcctctgcagatcgactgc ttggccgcatgggaggaatggctcctcgttgggacaaaacaaggccaccttcttctttac agaattcgaaaggaaactggttgcaacagatttgaagtgacattagagaagtcaaacaag aacttctccaagaagattcagcagatccatgttgtgtcccagttcaaaattttggtcagt ttattagaaaacaacatttacgttcatgacctgttgacatttcagcagatcacaacagtt tccaaggcgaagggtgcaactctcttcacctgtgacctgaagcactctgccacaggtgaa gaggtcttgaggatgtgtgtggcagtgaaaaagaagctccagctgtattactggaaggac agagagttctacgagctgcagggagacttcagtgtgccagatgtacccaagtcaatggca tggtgtgaagattcaatctgtgtgggtttcaagagggactattatctaataagggtggat ggtaaaggttccatcaaagaactcttccccacaggaaagcagcttgagccactggtagcc cctttggcagatgggaaagttgctgtaggccaggacgatcttactgttgtattaaatgaa gaaggaacttgtacacagaaatcaatagattcactgtttccgaatgtaaatttggggaat actattgtagaaccatatgctgttgctgactgttccattttcaaaacagaacatcaaccg ccgtacattgtggcagtactgccaagatatgtagagattcgtacttttgagccccgactc ctagtgcagagtattgagcttcagagaccacgcttcattacttctggaggtacaaatatt gtgtatgtggccagcaatcattttgtttggcgtctcattccggtttccattgcaacccag atccagcagcttcttcaagataagcaatttgaactggctctgcaattggcagatatgaag gatgactctgatactgaaaagcgacaacaaatccatcatattaagaatctgtatgccttc aaccttttctgccaaaagcgctttgatgaatccatgcaagtctttgccaagcttgggaca gatcctacccatgtcatgggtctctatcctgaactgttgcccagtgattacaagaaacag ctgcagtatcccaaccctgttccagttctgtctccagcagagctggagaaagcacacttg gcacttatagactacctgacacagaaaagaagtcagttagtgaagaagctgaatgactca gaccatcagtccagcacttctcctctcatggaggggacgcctaccatcaaatcaaagaag aagttgctgcagatcattgataccaccctgttgaaatgctacctccataccaatgtggcc ctagtggcaccactgttgcgactggagaacaatcactgccacatagaggaaagtgagcat gtgctcaagaaagcacacaaatacagtgagctgatcatactgtacgagaagaaaggtctg catgaaaaagctttgcaagtgctagtggatcagtcaaagaaagctaactcccccctgaag ggccatgagaggaccgtgcagtatttgcaacacttgggcaccgacaacttgaacttaata ttctcctattctgtttgggtacttagagactttcctgaagatggattgaaaatattcaca gaagatcttcctgaagtggaatcccttcctcgaaacaaagtcctcagtttcttgatagag aactttaaaaacctggctgttccgtacttggaacatataatccaaacctgggaagaggct ggttcagagttccacaactgcctgattcagctctactgtgaaaaagtgcaaggattaatg aaggaatatctcagctcttttcctccagataaactaccggtggcagctggagaagaggag ggggaacttggagagtatcgacaaaaactgcttttcttccttgagacttccagttgctac aatgctgagcagctcatcagtgacttcccctttgatggcctcctagaagaacgtgctctg ctgctgggacggatgggaaatcatgaacaagctctcttcatatatgttcatatcctgaag gatacaaaaatggctgaaaattactgtcacaaacactacgacaaaagcaaagatggcaac aaagatgtatacttgtctcttctccggatgtacctctcaccacctagtgttcactgcttg ggaccaatcaagatgaaactattggagcctcaagccaatctccaggctgcattgcaggtt ttggaacttcatcacagcaagttggacactaccaaagcaataaacctcctcccagcaaat actcaaattagtgagattcgaatcttcctggaaaaagtccttgaagaaaatgcccagaag aaaagattcagtcaagtacttaaaaatcttctccatgctgaattcctgagagtacaggag gaacggattttacaccagcaagtgaaatgtataatcacagaggaaaaactttgcagtgtg tgtaaaaagaagattggaaatagtgcctttgcccgctatcctaatgcaatagtcgtgcat tatttctgttccaaagaagtgagtgcagtagacacctga

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